RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
MDH1-210ENST00000472098 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
MDH1-210ENST00000472098 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
MDH1-210ENST00000472098 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
MDH1-210ENST00000472098 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
MDH1-210ENST00000472098 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
MDH1-210ENST00000472098 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
MDH1-210ENST00000472098 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
MDH1-210ENST00000472098 MS4A3Q96HJ5 214 aa17.05■□□□□ 0.32
MDH1-210ENST00000472098 ASTLQ6HA08 431 aaPredicted RBP17■□□□□ 0.31
MDH1-210ENST00000472098 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
MDH1-210ENST00000472098 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
MDH1-210ENST00000472098 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
MDH1-210ENST00000472098 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
MDH1-210ENST00000472098 METRNQ9UJH8 293 aa16.88■□□□□ 0.29
MDH1-210ENST00000472098 PKD2Q13563 968 aa16.85■□□□□ 0.29
MDH1-210ENST00000472098 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
MDH1-210ENST00000472098 NUBP1P53384 320 aa16.83■□□□□ 0.28
MDH1-210ENST00000472098 SLC39A7Q92504 469 aa16.82■□□□□ 0.28
MDH1-210ENST00000472098 C7P10643 843 aa16.81■□□□□ 0.28
MDH1-210ENST00000472098 ATN1P54259 1190 aaPredicted RBP16.8■□□□□ 0.28
MDH1-210ENST00000472098 TRPC6Q9Y210 931 aa16.8■□□□□ 0.28
MDH1-210ENST00000472098 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
MDH1-210ENST00000472098 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
MDH1-210ENST00000472098 PLSCR2Q9NRY7 297 aa16.75■□□□□ 0.27
MDH1-210ENST00000472098 POTEFA5A3E0 1075 aa16.74■□□□□ 0.27
MDH1-210ENST00000472098 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
MDH1-210ENST00000472098 GSE1Q14687 1217 aa16.72■□□□□ 0.27
MDH1-210ENST00000472098 MAP3K13O43283 966 aa16.71■□□□□ 0.27
MDH1-210ENST00000472098 POTEMA6NI47 508 aa16.7■□□□□ 0.26
MDH1-210ENST00000472098 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
MDH1-210ENST00000472098 FAM212AQ96EL1 285 aa16.69■□□□□ 0.26
MDH1-210ENST00000472098 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
MDH1-210ENST00000472098 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
MDH1-210ENST00000472098 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
MDH1-210ENST00000472098 LCE2DQ5TA82 110 aaPredicted RBP16.64■□□□□ 0.25
MDH1-210ENST00000472098 TIE1P35590 1138 aa16.61■□□□□ 0.25
MDH1-210ENST00000472098 MAMSTRQ6ZN01 415 aa16.58■□□□□ 0.24
MDH1-210ENST00000472098 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
MDH1-210ENST00000472098 COLQQ9Y215 455 aaPredicted RBP16.54■□□□□ 0.24
MDH1-210ENST00000472098 RGL2O15211 777 aa16.52■□□□□ 0.24
MDH1-210ENST00000472098 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
MDH1-210ENST00000472098 CHRM1P11229 460 aaPredicted RBP16.48■□□□□ 0.23
MDH1-210ENST00000472098 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
MDH1-210ENST00000472098 SGIP1Q9BQI5 828 aa16.46■□□□□ 0.23
MDH1-210ENST00000472098 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
MDH1-210ENST00000472098 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
MDH1-210ENST00000472098 PYGBP11216 843 aa16.41■□□□□ 0.22
MDH1-210ENST00000472098 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
MDH1-210ENST00000472098 RNF25Q96BH1 459 aaPredicted RBP16.4■□□□□ 0.22
MDH1-210ENST00000472098 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
MDH1-210ENST00000472098 IER5LQ5T953 404 aa16.37■□□□□ 0.21
MDH1-210ENST00000472098 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
MDH1-210ENST00000472098 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
MDH1-210ENST00000472098 SEC24BO95487 1268 aa16.34■□□□□ 0.21
MDH1-210ENST00000472098 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
MDH1-210ENST00000472098 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.2
MDH1-210ENST00000472098 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
MDH1-210ENST00000472098 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
MDH1-210ENST00000472098 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
MDH1-210ENST00000472098 IRX5P78411 483 aaPredicted RBP16.22■□□□□ 0.19
MDH1-210ENST00000472098 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
MDH1-210ENST00000472098 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
MDH1-210ENST00000472098 PCDHB8Q9UN66 801 aa16.16■□□□□ 0.18
MDH1-210ENST00000472098 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
MDH1-210ENST00000472098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
MDH1-210ENST00000472098 PLCG2P16885 1265 aa16.12■□□□□ 0.17
MDH1-210ENST00000472098 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
MDH1-210ENST00000472098 STK25O00506 426 aa16.11■□□□□ 0.17
MDH1-210ENST00000472098 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
MDH1-210ENST00000472098 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
MDH1-210ENST00000472098 ST18O60284 1047 aa16.09■□□□□ 0.17
MDH1-210ENST00000472098 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
MDH1-210ENST00000472098 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
MDH1-210ENST00000472098 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
MDH1-210ENST00000472098 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
MDH1-210ENST00000472098 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
MDH1-210ENST00000472098 OCEL1Q9H607 264 aa16.05■□□□□ 0.16
MDH1-210ENST00000472098 PSEN1P49768 467 aa16.04■□□□□ 0.16
MDH1-210ENST00000472098 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
MDH1-210ENST00000472098 PDCD7Q8N8D1 485 aaKnown RBP15.97■□□□□ 0.15
MDH1-210ENST00000472098 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
MDH1-210ENST00000472098 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
MDH1-210ENST00000472098 NKX1-1Q15270 411 aaPredicted RBP15.94■□□□□ 0.14
MDH1-210ENST00000472098 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
MDH1-210ENST00000472098 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.86■□□□□ 0.13
MDH1-210ENST00000472098 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
MDH1-210ENST00000472098 GTPBP6O43824 516 aaPredicted RBP15.83■□□□□ 0.12
MDH1-210ENST00000472098 TMEM121BQ9BXQ6 578 aaPredicted RBP15.83■□□□□ 0.12
MDH1-210ENST00000472098 HAP1P54257 671 aaPredicted RBP15.82■□□□□ 0.12
MDH1-210ENST00000472098 RYDENQ9NUL5 291 aaKnown RBP15.82■□□□□ 0.12
MDH1-210ENST00000472098 ILDR1Q86SU0 546 aaPredicted RBP15.8■□□□□ 0.12
MDH1-210ENST00000472098 EFCAB3Q8N7B9 438 aa15.78■□□□□ 0.12
MDH1-210ENST00000472098 MARVELD3Q96A59 401 aa15.78■□□□□ 0.12
MDH1-210ENST00000472098 SNPHO15079 494 aa15.76■□□□□ 0.11
MDH1-210ENST00000472098 SOX12O15370 315 aa15.74■□□□□ 0.11
MDH1-210ENST00000472098 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
MDH1-210ENST00000472098 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
MDH1-210ENST00000472098 MFRPQ9BY79 579 aa15.73■□□□□ 0.11
MDH1-210ENST00000472098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.114e-11■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms