RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
COPS3-206ENST00000471414 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
COPS3-206ENST00000471414 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
COPS3-206ENST00000471414 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
COPS3-206ENST00000471414 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
COPS3-206ENST00000471414 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
COPS3-206ENST00000471414 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
COPS3-206ENST00000471414 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
COPS3-206ENST00000471414 MAP3K13O43283 966 aa10.31□□□□□ -0.76
COPS3-206ENST00000471414 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
COPS3-206ENST00000471414 GSE1Q14687 1217 aa10.28□□□□□ -0.76
COPS3-206ENST00000471414 DCAF8Q5TAQ9 597 aa10.28□□□□□ -0.76
COPS3-206ENST00000471414 ASTLQ6HA08 431 aaPredicted RBP10.26□□□□□ -0.77
COPS3-206ENST00000471414 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
COPS3-206ENST00000471414 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
COPS3-206ENST00000471414 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
COPS3-206ENST00000471414 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
COPS3-206ENST00000471414 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
COPS3-206ENST00000471414 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
COPS3-206ENST00000471414 PYGBP11216 843 aa10.22□□□□□ -0.77
COPS3-206ENST00000471414 TIE1P35590 1138 aa10.2□□□□□ -0.78
COPS3-206ENST00000471414 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
COPS3-206ENST00000471414 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
COPS3-206ENST00000471414 ATN1P54259 1190 aaPredicted RBP10.16□□□□□ -0.78
COPS3-206ENST00000471414 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
COPS3-206ENST00000471414 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
COPS3-206ENST00000471414 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
COPS3-206ENST00000471414 PCDHB8Q9UN66 801 aa10.12□□□□□ -0.79
COPS3-206ENST00000471414 ZNF467Q7Z7K2 595 aaPredicted RBP10.11□□□□□ -0.79
COPS3-206ENST00000471414 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
COPS3-206ENST00000471414 C7P10643 843 aa10.07□□□□□ -0.8
COPS3-206ENST00000471414 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
COPS3-206ENST00000471414 LHX8Q68G74 356 aa10.06□□□□□ -0.8
COPS3-206ENST00000471414 METRNQ9UJH8 293 aa10.06□□□□□ -0.8
COPS3-206ENST00000471414 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
COPS3-206ENST00000471414 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
COPS3-206ENST00000471414 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
COPS3-206ENST00000471414 POTEB2H3BUK9 544 aa10.04□□□□□ -0.8
COPS3-206ENST00000471414 PKD2Q13563 968 aa10.04□□□□□ -0.8
COPS3-206ENST00000471414 IER5LQ5T953 404 aa10.03□□□□□ -0.8
COPS3-206ENST00000471414 PSEN1P49768 467 aa10.01□□□□□ -0.81
COPS3-206ENST00000471414 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
COPS3-206ENST00000471414 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
COPS3-206ENST00000471414 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
COPS3-206ENST00000471414 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
COPS3-206ENST00000471414 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
COPS3-206ENST00000471414 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
COPS3-206ENST00000471414 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
COPS3-206ENST00000471414 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
COPS3-206ENST00000471414 OTUD5Q96G74 571 aa9.92□□□□□ -0.82
COPS3-206ENST00000471414 RGL2O15211 777 aa9.9□□□□□ -0.82
COPS3-206ENST00000471414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
COPS3-206ENST00000471414 SEC24BO95487 1268 aa9.88□□□□□ -0.83
COPS3-206ENST00000471414 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
COPS3-206ENST00000471414 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
COPS3-206ENST00000471414 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
COPS3-206ENST00000471414 CABP2Q9NPB3 220 aa9.86□□□□□ -0.83
COPS3-206ENST00000471414 PLCG2P16885 1265 aa9.85□□□□□ -0.83
COPS3-206ENST00000471414 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
COPS3-206ENST00000471414 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
COPS3-206ENST00000471414 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
COPS3-206ENST00000471414 TAOK2Q9UL54 1235 aa9.82□□□□□ -0.84
COPS3-206ENST00000471414 EFCAB3Q8N7B9 438 aa9.81□□□□□ -0.84
COPS3-206ENST00000471414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.8□□□□□ -0.84
COPS3-206ENST00000471414 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
COPS3-206ENST00000471414 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
COPS3-206ENST00000471414 SOX12O15370 315 aa9.76□□□□□ -0.85
COPS3-206ENST00000471414 STK25O00506 426 aa9.74□□□□□ -0.85
COPS3-206ENST00000471414 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
COPS3-206ENST00000471414 MS4A4AQ96JQ5 239 aa9.74□□□□□ -0.85
COPS3-206ENST00000471414 STK24Q9Y6E0 443 aa9.73□□□□□ -0.85
COPS3-206ENST00000471414 HS6ST3Q8IZP7 471 aa9.72□□□□□ -0.85
COPS3-206ENST00000471414 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
COPS3-206ENST00000471414 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
COPS3-206ENST00000471414 TMEM121BQ9BXQ6 578 aaPredicted RBP9.71□□□□□ -0.86
COPS3-206ENST00000471414 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
COPS3-206ENST00000471414 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
COPS3-206ENST00000471414 PHF8Q9UPP1 1060 aa9.7□□□□□ -0.86
COPS3-206ENST00000471414 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
COPS3-206ENST00000471414 NLRP6P59044 892 aa9.65□□□□□ -0.86
COPS3-206ENST00000471414 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
COPS3-206ENST00000471414 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
COPS3-206ENST00000471414 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
COPS3-206ENST00000471414 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
COPS3-206ENST00000471414 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
COPS3-206ENST00000471414 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
COPS3-206ENST00000471414 MICALL2Q8IY33 904 aa9.61□□□□□ -0.87
COPS3-206ENST00000471414 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
COPS3-206ENST00000471414 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
COPS3-206ENST00000471414 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
COPS3-206ENST00000471414 G3V3G9 751 aa9.54□□□□□ -0.88
COPS3-206ENST00000471414 PPP1R37O75864 691 aa9.53□□□□□ -0.88
COPS3-206ENST00000471414 KIF3CO14782 793 aa9.48□□□□□ -0.89
COPS3-206ENST00000471414 SNPHO15079 494 aa9.48□□□□□ -0.89
COPS3-206ENST00000471414 HOXB3P14651 431 aaPredicted RBP9.48□□□□□ -0.89
COPS3-206ENST00000471414 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
COPS3-206ENST00000471414 ST18O60284 1047 aa9.47□□□□□ -0.89
COPS3-206ENST00000471414 GTPBP6O43824 516 aaPredicted RBP9.46□□□□□ -0.9
COPS3-206ENST00000471414 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
COPS3-206ENST00000471414 POTEMA6NI47 508 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms