RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
HERC3-208ENST00000470815 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
HERC3-208ENST00000470815 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
HERC3-208ENST00000470815 FKBP8Q14318 412 aa11.24□□□□□ -0.61
HERC3-208ENST00000470815 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
HERC3-208ENST00000470815 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
HERC3-208ENST00000470815 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
HERC3-208ENST00000470815 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
HERC3-208ENST00000470815 C7P10643 843 aa11.21□□□□□ -0.61
HERC3-208ENST00000470815 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
HERC3-208ENST00000470815 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
HERC3-208ENST00000470815 MAP3K13O43283 966 aa11.17□□□□□ -0.62
HERC3-208ENST00000470815 TIE1P35590 1138 aa11.15□□□□□ -0.62
HERC3-208ENST00000470815 NUBP1P53384 320 aa11.15□□□□□ -0.62
HERC3-208ENST00000470815 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
HERC3-208ENST00000470815 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
HERC3-208ENST00000470815 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
HERC3-208ENST00000470815 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
HERC3-208ENST00000470815 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
HERC3-208ENST00000470815 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
HERC3-208ENST00000470815 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
HERC3-208ENST00000470815 POTEJP0CG39 1038 aa11.06□□□□□ -0.64
HERC3-208ENST00000470815 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
HERC3-208ENST00000470815 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
HERC3-208ENST00000470815 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
HERC3-208ENST00000470815 IER5LQ5T953 404 aa11.01□□□□□ -0.65
HERC3-208ENST00000470815 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
HERC3-208ENST00000470815 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
HERC3-208ENST00000470815 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
HERC3-208ENST00000470815 SEC24BO95487 1268 aa10.95□□□□□ -0.66
HERC3-208ENST00000470815 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
HERC3-208ENST00000470815 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
HERC3-208ENST00000470815 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
HERC3-208ENST00000470815 POTEMA6NI47 508 aa10.92□□□□□ -0.66
HERC3-208ENST00000470815 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
HERC3-208ENST00000470815 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
HERC3-208ENST00000470815 PYGBP11216 843 aa10.88□□□□□ -0.67
HERC3-208ENST00000470815 GSE1Q14687 1217 aa10.86□□□□□ -0.67
HERC3-208ENST00000470815 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
HERC3-208ENST00000470815 PLCG2P16885 1265 aa10.83□□□□□ -0.68
HERC3-208ENST00000470815 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
HERC3-208ENST00000470815 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
HERC3-208ENST00000470815 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
HERC3-208ENST00000470815 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
HERC3-208ENST00000470815 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
HERC3-208ENST00000470815 CHRM1P11229 460 aaPredicted RBP10.8□□□□□ -0.68
HERC3-208ENST00000470815 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
HERC3-208ENST00000470815 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
HERC3-208ENST00000470815 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
HERC3-208ENST00000470815 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
HERC3-208ENST00000470815 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
HERC3-208ENST00000470815 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
HERC3-208ENST00000470815 PSEN1P49768 467 aa10.66□□□□□ -0.7
HERC3-208ENST00000470815 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
HERC3-208ENST00000470815 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
HERC3-208ENST00000470815 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
HERC3-208ENST00000470815 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
HERC3-208ENST00000470815 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
HERC3-208ENST00000470815 ST18O60284 1047 aa10.62□□□□□ -0.71
HERC3-208ENST00000470815 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
HERC3-208ENST00000470815 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
HERC3-208ENST00000470815 SNPHO15079 494 aa10.6□□□□□ -0.71
HERC3-208ENST00000470815 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
HERC3-208ENST00000470815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.71
HERC3-208ENST00000470815 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
HERC3-208ENST00000470815 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.72
HERC3-208ENST00000470815 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
HERC3-208ENST00000470815 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
HERC3-208ENST00000470815 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
HERC3-208ENST00000470815 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
HERC3-208ENST00000470815 G3V3G9 751 aa10.44□□□□□ -0.74
HERC3-208ENST00000470815 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
HERC3-208ENST00000470815 MARVELD3Q96A59 401 aa10.4□□□□□ -0.74
HERC3-208ENST00000470815 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
HERC3-208ENST00000470815 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
HERC3-208ENST00000470815 EMP3P54852 163 aa10.37□□□□□ -0.75
HERC3-208ENST00000470815 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
HERC3-208ENST00000470815 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
HERC3-208ENST00000470815 SOX12O15370 315 aa10.34□□□□□ -0.75
HERC3-208ENST00000470815 HOXB3P14651 431 aaPredicted RBP10.33□□□□□ -0.76
HERC3-208ENST00000470815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
HERC3-208ENST00000470815 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
HERC3-208ENST00000470815 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
HERC3-208ENST00000470815 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
HERC3-208ENST00000470815 MICALL2Q8IY33 904 aa10.29□□□□□ -0.76
HERC3-208ENST00000470815 HS3ST6Q96QI5 342 aa10.29□□□□□ -0.76
HERC3-208ENST00000470815 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
HERC3-208ENST00000470815 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
HERC3-208ENST00000470815 TAOK2Q9UL54 1235 aa10.27□□□□□ -0.77
HERC3-208ENST00000470815 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
HERC3-208ENST00000470815 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
HERC3-208ENST00000470815 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
HERC3-208ENST00000470815 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
HERC3-208ENST00000470815 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
HERC3-208ENST00000470815 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
HERC3-208ENST00000470815 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
HERC3-208ENST00000470815 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
HERC3-208ENST00000470815 RIMBP2O15034 1052 aa10.23□□□□□ -0.77
HERC3-208ENST00000470815 TMEM92Q6UXU6 159 aa10.22□□□□□ -0.77
HERC3-208ENST00000470815 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms