RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
RBM39-227ENST00000470563 BCANQ96GW7 911 aa12.5□□□□□ -0.41
RBM39-227ENST00000470563 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
RBM39-227ENST00000470563 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
RBM39-227ENST00000470563 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
RBM39-227ENST00000470563 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
RBM39-227ENST00000470563 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
RBM39-227ENST00000470563 KDM2AQ9Y2K7 1162 aa12.43□□□□□ -0.42
RBM39-227ENST00000470563 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
RBM39-227ENST00000470563 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
RBM39-227ENST00000470563 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
RBM39-227ENST00000470563 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
RBM39-227ENST00000470563 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
RBM39-227ENST00000470563 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
RBM39-227ENST00000470563 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
RBM39-227ENST00000470563 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
RBM39-227ENST00000470563 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
RBM39-227ENST00000470563 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
RBM39-227ENST00000470563 STK25O00506 426 aa12.22□□□□□ -0.45
RBM39-227ENST00000470563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
RBM39-227ENST00000470563 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
RBM39-227ENST00000470563 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
RBM39-227ENST00000470563 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
RBM39-227ENST00000470563 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
RBM39-227ENST00000470563 PYGBP11216 843 aa12.14□□□□□ -0.47
RBM39-227ENST00000470563 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
RBM39-227ENST00000470563 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
RBM39-227ENST00000470563 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
RBM39-227ENST00000470563 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
RBM39-227ENST00000470563 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
RBM39-227ENST00000470563 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
RBM39-227ENST00000470563 POTEHQ6S545 545 aa12.05□□□□□ -0.48
RBM39-227ENST00000470563 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
RBM39-227ENST00000470563 NBR1Q14596 966 aa12.02□□□□□ -0.49
RBM39-227ENST00000470563 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
RBM39-227ENST00000470563 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
RBM39-227ENST00000470563 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
RBM39-227ENST00000470563 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
RBM39-227ENST00000470563 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
RBM39-227ENST00000470563 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
RBM39-227ENST00000470563 PSEN1P49768 467 aa11.93□□□□□ -0.5
RBM39-227ENST00000470563 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
RBM39-227ENST00000470563 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
RBM39-227ENST00000470563 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
RBM39-227ENST00000470563 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
RBM39-227ENST00000470563 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
RBM39-227ENST00000470563 SOX12O15370 315 aa11.88□□□□□ -0.51
RBM39-227ENST00000470563 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
RBM39-227ENST00000470563 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
RBM39-227ENST00000470563 MAP3K13O43283 966 aa11.82□□□□□ -0.52
RBM39-227ENST00000470563 NLRP6P59044 892 aa11.82□□□□□ -0.52
RBM39-227ENST00000470563 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
RBM39-227ENST00000470563 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
RBM39-227ENST00000470563 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
RBM39-227ENST00000470563 CD44P16070 742 aaKnown RBP11.73□□□□□ -0.53
RBM39-227ENST00000470563 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
RBM39-227ENST00000470563 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
RBM39-227ENST00000470563 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
RBM39-227ENST00000470563 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
RBM39-227ENST00000470563 PPP1R37O75864 691 aa11.69□□□□□ -0.54
RBM39-227ENST00000470563 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
RBM39-227ENST00000470563 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
RBM39-227ENST00000470563 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
RBM39-227ENST00000470563 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
RBM39-227ENST00000470563 MFSD10Q14728 455 aa11.66□□□□□ -0.54
RBM39-227ENST00000470563 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
RBM39-227ENST00000470563 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
RBM39-227ENST00000470563 TIE1P35590 1138 aa11.63□□□□□ -0.55
RBM39-227ENST00000470563 CLCN6P51797 869 aa11.63□□□□□ -0.55
RBM39-227ENST00000470563 E2F4Q16254 413 aa11.63□□□□□ -0.55
RBM39-227ENST00000470563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
RBM39-227ENST00000470563 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
RBM39-227ENST00000470563 PDE4AP27815 886 aa11.6□□□□□ -0.55
RBM39-227ENST00000470563 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
RBM39-227ENST00000470563 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
RBM39-227ENST00000470563 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
RBM39-227ENST00000470563 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
RBM39-227ENST00000470563 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
RBM39-227ENST00000470563 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
RBM39-227ENST00000470563 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
RBM39-227ENST00000470563 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
RBM39-227ENST00000470563 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
RBM39-227ENST00000470563 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
RBM39-227ENST00000470563 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
RBM39-227ENST00000470563 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
RBM39-227ENST00000470563 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
RBM39-227ENST00000470563 HAX1O00165 279 aa11.46□□□□□ -0.57
RBM39-227ENST00000470563 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
RBM39-227ENST00000470563 SMYD5Q6GMV2 418 aa11.45□□□□□ -0.58
RBM39-227ENST00000470563 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
RBM39-227ENST00000470563 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
RBM39-227ENST00000470563 EVX2Q03828 476 aa11.42□□□□□ -0.58
RBM39-227ENST00000470563 SEMA3EO15041 775 aa11.41□□□□□ -0.58
RBM39-227ENST00000470563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.581e-37■■□□□ 13.9
RBM39-227ENST00000470563 IER5LQ5T953 404 aa11.4□□□□□ -0.58
RBM39-227ENST00000470563 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
RBM39-227ENST00000470563 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
RBM39-227ENST00000470563 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
RBM39-227ENST00000470563 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
RBM39-227ENST00000470563 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms