RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
CHD6-206ENST00000470470 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
CHD6-206ENST00000470470 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
CHD6-206ENST00000470470 C7P10643 843 aa12.29□□□□□ -0.44
CHD6-206ENST00000470470 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
CHD6-206ENST00000470470 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
CHD6-206ENST00000470470 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
CHD6-206ENST00000470470 PROM2Q8N271 834 aa12.26□□□□□ -0.45
CHD6-206ENST00000470470 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
CHD6-206ENST00000470470 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
CHD6-206ENST00000470470 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
CHD6-206ENST00000470470 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
CHD6-206ENST00000470470 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
CHD6-206ENST00000470470 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
CHD6-206ENST00000470470 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
CHD6-206ENST00000470470 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
CHD6-206ENST00000470470 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
CHD6-206ENST00000470470 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
CHD6-206ENST00000470470 KIF12Q96FN5 646 aa12□□□□□ -0.49
CHD6-206ENST00000470470 MIER1Q8N108 512 aa11.97□□□□□ -0.49
CHD6-206ENST00000470470 TIE1P35590 1138 aa11.96□□□□□ -0.49
CHD6-206ENST00000470470 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
CHD6-206ENST00000470470 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
CHD6-206ENST00000470470 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
CHD6-206ENST00000470470 MAP3K13O43283 966 aa11.89□□□□□ -0.51
CHD6-206ENST00000470470 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CHD6-206ENST00000470470 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
CHD6-206ENST00000470470 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
CHD6-206ENST00000470470 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
CHD6-206ENST00000470470 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
CHD6-206ENST00000470470 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
CHD6-206ENST00000470470 IER5LQ5T953 404 aa11.84□□□□□ -0.51
CHD6-206ENST00000470470 ST18O60284 1047 aa11.79□□□□□ -0.52
CHD6-206ENST00000470470 NUBP1P53384 320 aa11.78□□□□□ -0.52
CHD6-206ENST00000470470 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
CHD6-206ENST00000470470 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
CHD6-206ENST00000470470 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
CHD6-206ENST00000470470 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
CHD6-206ENST00000470470 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
CHD6-206ENST00000470470 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
CHD6-206ENST00000470470 FKBP8Q14318 412 aa11.69□□□□□ -0.54
CHD6-206ENST00000470470 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
CHD6-206ENST00000470470 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
CHD6-206ENST00000470470 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
CHD6-206ENST00000470470 PLCG2P16885 1265 aa11.64□□□□□ -0.55
CHD6-206ENST00000470470 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
CHD6-206ENST00000470470 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
CHD6-206ENST00000470470 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
CHD6-206ENST00000470470 SNPHO15079 494 aa11.59□□□□□ -0.55
CHD6-206ENST00000470470 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
CHD6-206ENST00000470470 PYGBP11216 843 aa11.52□□□□□ -0.57
CHD6-206ENST00000470470 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
CHD6-206ENST00000470470 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
CHD6-206ENST00000470470 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
CHD6-206ENST00000470470 ZCCHC6Q5VYS8 1495 aaKnown RBP11.48□□□□□ -0.57
CHD6-206ENST00000470470 GSE1Q14687 1217 aa11.45□□□□□ -0.58
CHD6-206ENST00000470470 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
CHD6-206ENST00000470470 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
CHD6-206ENST00000470470 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
CHD6-206ENST00000470470 EMP3P54852 163 aa11.4□□□□□ -0.58
CHD6-206ENST00000470470 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
CHD6-206ENST00000470470 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
CHD6-206ENST00000470470 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
CHD6-206ENST00000470470 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
CHD6-206ENST00000470470 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
CHD6-206ENST00000470470 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
CHD6-206ENST00000470470 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
CHD6-206ENST00000470470 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
CHD6-206ENST00000470470 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
CHD6-206ENST00000470470 DCAF1Q9Y4B6 1507 aa11.32□□□□□ -0.6
CHD6-206ENST00000470470 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
CHD6-206ENST00000470470 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
CHD6-206ENST00000470470 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
CHD6-206ENST00000470470 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
CHD6-206ENST00000470470 PSEN1P49768 467 aa11.28□□□□□ -0.6
CHD6-206ENST00000470470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.619e-8■■■□□ 14.9
CHD6-206ENST00000470470 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
CHD6-206ENST00000470470 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
CHD6-206ENST00000470470 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
CHD6-206ENST00000470470 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
CHD6-206ENST00000470470 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
CHD6-206ENST00000470470 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.63
CHD6-206ENST00000470470 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
CHD6-206ENST00000470470 G3V3G9 751 aa11.13□□□□□ -0.63
CHD6-206ENST00000470470 HOXB3P14651 431 aaPredicted RBP11.13□□□□□ -0.63
CHD6-206ENST00000470470 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
CHD6-206ENST00000470470 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
CHD6-206ENST00000470470 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
CHD6-206ENST00000470470 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
CHD6-206ENST00000470470 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
CHD6-206ENST00000470470 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
CHD6-206ENST00000470470 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
CHD6-206ENST00000470470 ERBB3P21860 1342 aa11.07□□□□□ -0.64
CHD6-206ENST00000470470 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
CHD6-206ENST00000470470 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
CHD6-206ENST00000470470 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
CHD6-206ENST00000470470 EFCAB3Q8N7B9 438 aa10.98□□□□□ -0.65
CHD6-206ENST00000470470 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
CHD6-206ENST00000470470 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
CHD6-206ENST00000470470 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms