RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
SRRM1-208ENST00000470243 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
SRRM1-208ENST00000470243 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-208ENST00000470243 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
SRRM1-208ENST00000470243 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-208ENST00000470243 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
SRRM1-208ENST00000470243 POTEMA6NI47 508 aa10.56□□□□□ -0.72
SRRM1-208ENST00000470243 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-208ENST00000470243 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-208ENST00000470243 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
SRRM1-208ENST00000470243 POTEGQ6S5H5 508 aa10.53□□□□□ -0.72
SRRM1-208ENST00000470243 SLC39A7Q92504 469 aa10.52□□□□□ -0.73
SRRM1-208ENST00000470243 C7P10643 843 aa10.51□□□□□ -0.73
SRRM1-208ENST00000470243 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
SRRM1-208ENST00000470243 CCDC61Q9Y6R9 512 aa10.49□□□□□ -0.73
SRRM1-208ENST00000470243 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
SRRM1-208ENST00000470243 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
SRRM1-208ENST00000470243 TRPC6Q9Y210 931 aa10.46□□□□□ -0.73
SRRM1-208ENST00000470243 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
SRRM1-208ENST00000470243 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
SRRM1-208ENST00000470243 MIER1Q8N108 512 aa10.43□□□□□ -0.74
SRRM1-208ENST00000470243 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
SRRM1-208ENST00000470243 MAP3K13O43283 966 aa10.41□□□□□ -0.74
SRRM1-208ENST00000470243 PKD2Q13563 968 aa10.41□□□□□ -0.74
SRRM1-208ENST00000470243 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
SRRM1-208ENST00000470243 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-208ENST00000470243 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
SRRM1-208ENST00000470243 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-208ENST00000470243 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
SRRM1-208ENST00000470243 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
SRRM1-208ENST00000470243 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
SRRM1-208ENST00000470243 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
SRRM1-208ENST00000470243 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
SRRM1-208ENST00000470243 TIE1P35590 1138 aa10.33□□□□□ -0.76
SRRM1-208ENST00000470243 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
SRRM1-208ENST00000470243 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
SRRM1-208ENST00000470243 SEC24BO95487 1268 aa10.3□□□□□ -0.76
SRRM1-208ENST00000470243 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
SRRM1-208ENST00000470243 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
SRRM1-208ENST00000470243 PCDHB13Q9Y5F0 798 aa10.26□□□□□ -0.77
SRRM1-208ENST00000470243 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
SRRM1-208ENST00000470243 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
SRRM1-208ENST00000470243 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
SRRM1-208ENST00000470243 NUBP1P53384 320 aa10.2□□□□□ -0.78
SRRM1-208ENST00000470243 IFNL1Q8IU54 200 aa10.2□□□□□ -0.78
SRRM1-208ENST00000470243 RGL2O15211 777 aa10.19□□□□□ -0.78
SRRM1-208ENST00000470243 SGIP1Q9BQI5 828 aa10.18□□□□□ -0.78
SRRM1-208ENST00000470243 IER5LQ5T953 404 aa10.17□□□□□ -0.78
SRRM1-208ENST00000470243 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
SRRM1-208ENST00000470243 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SRRM1-208ENST00000470243 SLAIN1Q8ND83 568 aa10.15□□□□□ -0.78
SRRM1-208ENST00000470243 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
SRRM1-208ENST00000470243 FAM212AQ96EL1 285 aa10.13□□□□□ -0.79
SRRM1-208ENST00000470243 PLCG2P16885 1265 aa10.11□□□□□ -0.79
SRRM1-208ENST00000470243 ST18O60284 1047 aa10.09□□□□□ -0.79
SRRM1-208ENST00000470243 PYGBP11216 843 aa10.07□□□□□ -0.8
SRRM1-208ENST00000470243 GSE1Q14687 1217 aa10.07□□□□□ -0.8
SRRM1-208ENST00000470243 DCAF8Q5TAQ9 597 aa10.07□□□□□ -0.8
SRRM1-208ENST00000470243 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
SRRM1-208ENST00000470243 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-208ENST00000470243 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-208ENST00000470243 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-208ENST00000470243 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
SRRM1-208ENST00000470243 PCDHB8Q9UN66 801 aa10.03□□□□□ -0.8
SRRM1-208ENST00000470243 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
SRRM1-208ENST00000470243 OCEL1Q9H607 264 aa10□□□□□ -0.81
SRRM1-208ENST00000470243 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-208ENST00000470243 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
SRRM1-208ENST00000470243 MARVELD3Q96A59 401 aa9.95□□□□□ -0.82
SRRM1-208ENST00000470243 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
SRRM1-208ENST00000470243 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
SRRM1-208ENST00000470243 RIOK3O14730 519 aaKnown RBP9.93□□□□□ -0.82
SRRM1-208ENST00000470243 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
SRRM1-208ENST00000470243 SNPHO15079 494 aa9.89□□□□□ -0.83
SRRM1-208ENST00000470243 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
SRRM1-208ENST00000470243 CHRM1P11229 460 aaPredicted RBP9.88□□□□□ -0.83
SRRM1-208ENST00000470243 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
SRRM1-208ENST00000470243 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
SRRM1-208ENST00000470243 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
SRRM1-208ENST00000470243 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
SRRM1-208ENST00000470243 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
SRRM1-208ENST00000470243 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
SRRM1-208ENST00000470243 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
SRRM1-208ENST00000470243 C3orf67Q6ZVT6 689 aa9.85□□□□□ -0.83
SRRM1-208ENST00000470243 STK25O00506 426 aa9.84□□□□□ -0.83
SRRM1-208ENST00000470243 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
SRRM1-208ENST00000470243 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
SRRM1-208ENST00000470243 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
SRRM1-208ENST00000470243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-208ENST00000470243 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-208ENST00000470243 ZFP91Q96JP5 570 aaPredicted RBP9.82□□□□□ -0.84
SRRM1-208ENST00000470243 DNAJC5Q9H3Z4 198 aa9.82□□□□□ -0.84
SRRM1-208ENST00000470243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.82□□□□□ -0.849e-10■■■□□ 17
SRRM1-208ENST00000470243 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
SRRM1-208ENST00000470243 PSEN1P49768 467 aa9.8□□□□□ -0.84
SRRM1-208ENST00000470243 EMP3P54852 163 aa9.8□□□□□ -0.84
SRRM1-208ENST00000470243 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SRRM1-208ENST00000470243 KDM2AQ9Y2K7 1162 aa9.8□□□□□ -0.84
SRRM1-208ENST00000470243 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
SRRM1-208ENST00000470243 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms