RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
COL11A1-208ENST00000470170 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
COL11A1-208ENST00000470170 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
COL11A1-208ENST00000470170 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
COL11A1-208ENST00000470170 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
COL11A1-208ENST00000470170 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
COL11A1-208ENST00000470170 KIF12Q96FN5 646 aa17.19■□□□□ 0.34
COL11A1-208ENST00000470170 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
COL11A1-208ENST00000470170 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
COL11A1-208ENST00000470170 DCBLD2Q96PD2 775 aa17.15■□□□□ 0.34
COL11A1-208ENST00000470170 MAP3K13O43283 966 aa17.14■□□□□ 0.33
COL11A1-208ENST00000470170 PYGBP11216 843 aa17.05■□□□□ 0.32
COL11A1-208ENST00000470170 GSE1Q14687 1217 aa17.05■□□□□ 0.32
COL11A1-208ENST00000470170 PCDHB13Q9Y5F0 798 aa17.03■□□□□ 0.32
COL11A1-208ENST00000470170 TRPC6Q9Y210 931 aa17.02■□□□□ 0.32
COL11A1-208ENST00000470170 CIZ1Q9ULV3 898 aaPredicted RBP16.99■□□□□ 0.31
COL11A1-208ENST00000470170 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
COL11A1-208ENST00000470170 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
COL11A1-208ENST00000470170 ASTLQ6HA08 431 aaPredicted RBP16.93■□□□□ 0.3
COL11A1-208ENST00000470170 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
COL11A1-208ENST00000470170 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
COL11A1-208ENST00000470170 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
COL11A1-208ENST00000470170 TIE1P35590 1138 aa16.87■□□□□ 0.29
COL11A1-208ENST00000470170 ATN1P54259 1190 aaPredicted RBP16.87■□□□□ 0.29
COL11A1-208ENST00000470170 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
COL11A1-208ENST00000470170 CHRM1P11229 460 aaPredicted RBP16.85■□□□□ 0.29
COL11A1-208ENST00000470170 TTLL13PA6NNM8 815 aa16.83■□□□□ 0.28
COL11A1-208ENST00000470170 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
COL11A1-208ENST00000470170 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
COL11A1-208ENST00000470170 LHX8Q68G74 356 aa16.76■□□□□ 0.27
COL11A1-208ENST00000470170 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
COL11A1-208ENST00000470170 METRNQ9UJH8 293 aa16.74■□□□□ 0.27
COL11A1-208ENST00000470170 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
COL11A1-208ENST00000470170 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
COL11A1-208ENST00000470170 C7P10643 843 aa16.7■□□□□ 0.26
COL11A1-208ENST00000470170 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
COL11A1-208ENST00000470170 PSEN1P49768 467 aa16.63■□□□□ 0.25
COL11A1-208ENST00000470170 POTEFA5A3E0 1075 aa16.59■□□□□ 0.25
COL11A1-208ENST00000470170 PDAP1Q13442 181 aaKnown RBP16.59■□□□□ 0.25
COL11A1-208ENST00000470170 RNF25Q96BH1 459 aaPredicted RBP16.59■□□□□ 0.25
COL11A1-208ENST00000470170 IER5LQ5T953 404 aa16.57■□□□□ 0.24
COL11A1-208ENST00000470170 PKD2Q13563 968 aa16.56■□□□□ 0.24
COL11A1-208ENST00000470170 COLQQ9Y215 455 aaPredicted RBP16.56■□□□□ 0.24
COL11A1-208ENST00000470170 SEC24BO95487 1268 aa16.54■□□□□ 0.24
COL11A1-208ENST00000470170 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-208ENST00000470170 RIOK3O14730 519 aaKnown RBP16.52■□□□□ 0.24
COL11A1-208ENST00000470170 POTEJP0CG39 1038 aa16.49■□□□□ 0.23
COL11A1-208ENST00000470170 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
COL11A1-208ENST00000470170 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
COL11A1-208ENST00000470170 CABP2Q9NPB3 220 aa16.45■□□□□ 0.22
COL11A1-208ENST00000470170 PLCG2P16885 1265 aa16.44■□□□□ 0.22
COL11A1-208ENST00000470170 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
COL11A1-208ENST00000470170 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
COL11A1-208ENST00000470170 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-208ENST00000470170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
COL11A1-208ENST00000470170 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
COL11A1-208ENST00000470170 RGL2O15211 777 aa16.4■□□□□ 0.22
COL11A1-208ENST00000470170 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
COL11A1-208ENST00000470170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL11A1-208ENST00000470170 MAMSTRQ6ZN01 415 aa16.32■□□□□ 0.2
COL11A1-208ENST00000470170 PDCD7Q8N8D1 485 aaKnown RBP16.32■□□□□ 0.2
COL11A1-208ENST00000470170 EFCAB3Q8N7B9 438 aa16.31■□□□□ 0.2
COL11A1-208ENST00000470170 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
COL11A1-208ENST00000470170 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
COL11A1-208ENST00000470170 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
COL11A1-208ENST00000470170 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
COL11A1-208ENST00000470170 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
COL11A1-208ENST00000470170 STK25O00506 426 aa16.23■□□□□ 0.19
COL11A1-208ENST00000470170 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
COL11A1-208ENST00000470170 SOX12O15370 315 aa16.14■□□□□ 0.17
COL11A1-208ENST00000470170 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
COL11A1-208ENST00000470170 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
COL11A1-208ENST00000470170 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
COL11A1-208ENST00000470170 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
COL11A1-208ENST00000470170 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
COL11A1-208ENST00000470170 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
COL11A1-208ENST00000470170 BOLA1Q9Y3E2 137 aa16.06■□□□□ 0.16
COL11A1-208ENST00000470170 MFRPQ9BY79 579 aa16.04■□□□□ 0.16
COL11A1-208ENST00000470170 G3V3G9 751 aa16.03■□□□□ 0.16
COL11A1-208ENST00000470170 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
COL11A1-208ENST00000470170 NLRP6P59044 892 aa16.02■□□□□ 0.16
COL11A1-208ENST00000470170 HS6ST3Q8IZP7 471 aa16.02■□□□□ 0.16
COL11A1-208ENST00000470170 FBXO22Q8NEZ5 403 aa16.02■□□□□ 0.16
COL11A1-208ENST00000470170 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
COL11A1-208ENST00000470170 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
COL11A1-208ENST00000470170 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
COL11A1-208ENST00000470170 FAM163AQ96GL9 167 aaPredicted RBP15.92■□□□□ 0.14
COL11A1-208ENST00000470170 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
COL11A1-208ENST00000470170 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
COL11A1-208ENST00000470170 LCE2DQ5TA82 110 aaPredicted RBP15.88■□□□□ 0.13
COL11A1-208ENST00000470170 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
COL11A1-208ENST00000470170 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
COL11A1-208ENST00000470170 PPP1R37O75864 691 aa15.81■□□□□ 0.12
COL11A1-208ENST00000470170 TMEM92Q6UXU6 159 aa15.81■□□□□ 0.12
COL11A1-208ENST00000470170 SNPHO15079 494 aa15.77■□□□□ 0.12
COL11A1-208ENST00000470170 POTEMA6NI47 508 aa15.76■□□□□ 0.11
COL11A1-208ENST00000470170 ST18O60284 1047 aa15.76■□□□□ 0.11
COL11A1-208ENST00000470170 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
COL11A1-208ENST00000470170 HOXB3P14651 431 aaPredicted RBP15.66■□□□□ 0.1
COL11A1-208ENST00000470170 RYDENQ9NUL5 291 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms