RNA–Protein interactions for RNA: ENST00000469966.1

CCDC66-212, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-212ENST00000469966 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
CCDC66-212ENST00000469966 NUBP1P53384 320 aa12.14□□□□□ -0.47
CCDC66-212ENST00000469966 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
CCDC66-212ENST00000469966 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
CCDC66-212ENST00000469966 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
CCDC66-212ENST00000469966 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
CCDC66-212ENST00000469966 LHX8Q68G74 356 aa12.03□□□□□ -0.48
CCDC66-212ENST00000469966 MAP3K13O43283 966 aa12.02□□□□□ -0.49
CCDC66-212ENST00000469966 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
CCDC66-212ENST00000469966 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
CCDC66-212ENST00000469966 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
CCDC66-212ENST00000469966 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
CCDC66-212ENST00000469966 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
CCDC66-212ENST00000469966 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
CCDC66-212ENST00000469966 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
CCDC66-212ENST00000469966 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
CCDC66-212ENST00000469966 TIE1P35590 1138 aa11.91□□□□□ -0.5
CCDC66-212ENST00000469966 GSE1Q14687 1217 aa11.91□□□□□ -0.5
CCDC66-212ENST00000469966 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
CCDC66-212ENST00000469966 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
CCDC66-212ENST00000469966 C7P10643 843 aa11.88□□□□□ -0.51
CCDC66-212ENST00000469966 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
CCDC66-212ENST00000469966 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
CCDC66-212ENST00000469966 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
CCDC66-212ENST00000469966 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
CCDC66-212ENST00000469966 PYGBP11216 843 aa11.86□□□□□ -0.51
CCDC66-212ENST00000469966 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
CCDC66-212ENST00000469966 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
CCDC66-212ENST00000469966 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
CCDC66-212ENST00000469966 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
CCDC66-212ENST00000469966 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
CCDC66-212ENST00000469966 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
CCDC66-212ENST00000469966 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
CCDC66-212ENST00000469966 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
CCDC66-212ENST00000469966 IER5LQ5T953 404 aa11.73□□□□□ -0.53
CCDC66-212ENST00000469966 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
CCDC66-212ENST00000469966 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
CCDC66-212ENST00000469966 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
CCDC66-212ENST00000469966 SEC24BO95487 1268 aa11.68□□□□□ -0.54
CCDC66-212ENST00000469966 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
CCDC66-212ENST00000469966 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
CCDC66-212ENST00000469966 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
CCDC66-212ENST00000469966 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
CCDC66-212ENST00000469966 PSEN1P49768 467 aa11.6□□□□□ -0.55
CCDC66-212ENST00000469966 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
CCDC66-212ENST00000469966 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
CCDC66-212ENST00000469966 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
CCDC66-212ENST00000469966 PLCG2P16885 1265 aa11.57□□□□□ -0.56
CCDC66-212ENST00000469966 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
CCDC66-212ENST00000469966 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
CCDC66-212ENST00000469966 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
CCDC66-212ENST00000469966 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
CCDC66-212ENST00000469966 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
CCDC66-212ENST00000469966 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
CCDC66-212ENST00000469966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.585e-7■■■■■ 29
CCDC66-212ENST00000469966 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
CCDC66-212ENST00000469966 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
CCDC66-212ENST00000469966 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-212ENST00000469966 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
CCDC66-212ENST00000469966 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
CCDC66-212ENST00000469966 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
CCDC66-212ENST00000469966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-212ENST00000469966 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-212ENST00000469966 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-212ENST00000469966 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
CCDC66-212ENST00000469966 PKD2Q13563 968 aa11.34□□□□□ -0.59
CCDC66-212ENST00000469966 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
CCDC66-212ENST00000469966 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
CCDC66-212ENST00000469966 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
CCDC66-212ENST00000469966 SOX12O15370 315 aa11.3□□□□□ -0.6
CCDC66-212ENST00000469966 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
CCDC66-212ENST00000469966 POTEMA6NI47 508 aa11.29□□□□□ -0.6
CCDC66-212ENST00000469966 LCE2DQ5TA82 110 aaPredicted RBP11.27□□□□□ -0.61
CCDC66-212ENST00000469966 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
CCDC66-212ENST00000469966 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
CCDC66-212ENST00000469966 G3V3G9 751 aa11.26□□□□□ -0.61
CCDC66-212ENST00000469966 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
CCDC66-212ENST00000469966 RGL2O15211 777 aa11.24□□□□□ -0.61
CCDC66-212ENST00000469966 SNPHO15079 494 aa11.23□□□□□ -0.61
CCDC66-212ENST00000469966 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
CCDC66-212ENST00000469966 STK24Q9Y6E0 443 aa11.22□□□□□ -0.61
CCDC66-212ENST00000469966 STK25O00506 426 aa11.21□□□□□ -0.61
CCDC66-212ENST00000469966 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
CCDC66-212ENST00000469966 ST18O60284 1047 aa11.18□□□□□ -0.62
CCDC66-212ENST00000469966 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
CCDC66-212ENST00000469966 NLRP6P59044 892 aa11.17□□□□□ -0.62
CCDC66-212ENST00000469966 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
CCDC66-212ENST00000469966 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
CCDC66-212ENST00000469966 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
CCDC66-212ENST00000469966 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
CCDC66-212ENST00000469966 TMEM92Q6UXU6 159 aa11.03□□□□□ -0.64
CCDC66-212ENST00000469966 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
CCDC66-212ENST00000469966 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
CCDC66-212ENST00000469966 DOK7Q18PE1 504 aa11□□□□□ -0.65
CCDC66-212ENST00000469966 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
CCDC66-212ENST00000469966 MARVELD3Q96A59 401 aa11□□□□□ -0.65
CCDC66-212ENST00000469966 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
CCDC66-212ENST00000469966 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
CCDC66-212ENST00000469966 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
CCDC66-212ENST00000469966 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms