RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
TTC3-213ENST00000469939 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
TTC3-213ENST00000469939 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
TTC3-213ENST00000469939 NUBP1P53384 320 aa10.6□□□□□ -0.71
TTC3-213ENST00000469939 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
TTC3-213ENST00000469939 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
TTC3-213ENST00000469939 MS4A3Q96HJ5 214 aa10.57□□□□□ -0.72
TTC3-213ENST00000469939 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
TTC3-213ENST00000469939 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
TTC3-213ENST00000469939 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
TTC3-213ENST00000469939 OTUD5Q96G74 571 aa10.52□□□□□ -0.73
TTC3-213ENST00000469939 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
TTC3-213ENST00000469939 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
TTC3-213ENST00000469939 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
TTC3-213ENST00000469939 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
TTC3-213ENST00000469939 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
TTC3-213ENST00000469939 GSE1Q14687 1217 aa10.48□□□□□ -0.73
TTC3-213ENST00000469939 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
TTC3-213ENST00000469939 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
TTC3-213ENST00000469939 C7P10643 843 aa10.46□□□□□ -0.73
TTC3-213ENST00000469939 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.73
TTC3-213ENST00000469939 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
TTC3-213ENST00000469939 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
TTC3-213ENST00000469939 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
TTC3-213ENST00000469939 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
TTC3-213ENST00000469939 MAP3K13O43283 966 aa10.39□□□□□ -0.75
TTC3-213ENST00000469939 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
TTC3-213ENST00000469939 PYGBP11216 843 aa10.37□□□□□ -0.75
TTC3-213ENST00000469939 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
TTC3-213ENST00000469939 BMP2KQ9NSY1 1161 aaPredicted RBP10.36□□□□□ -0.75
TTC3-213ENST00000469939 POTEMA6NI47 508 aa10.35□□□□□ -0.75
TTC3-213ENST00000469939 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
TTC3-213ENST00000469939 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
TTC3-213ENST00000469939 PKD2Q13563 968 aa10.34□□□□□ -0.75
TTC3-213ENST00000469939 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
TTC3-213ENST00000469939 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
TTC3-213ENST00000469939 TIE1P35590 1138 aa10.33□□□□□ -0.76
TTC3-213ENST00000469939 SCUBE2Q9NQ36 999 aa10.33□□□□□ -0.76
TTC3-213ENST00000469939 POTEGQ6S5H5 508 aa10.32□□□□□ -0.76
TTC3-213ENST00000469939 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
TTC3-213ENST00000469939 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
TTC3-213ENST00000469939 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
TTC3-213ENST00000469939 SEC24BO95487 1268 aa10.29□□□□□ -0.76
TTC3-213ENST00000469939 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.77
TTC3-213ENST00000469939 POTEFA5A3E0 1075 aa10.25□□□□□ -0.77
TTC3-213ENST00000469939 IFNL1Q8IU54 200 aa10.25□□□□□ -0.77
TTC3-213ENST00000469939 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
TTC3-213ENST00000469939 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
TTC3-213ENST00000469939 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
TTC3-213ENST00000469939 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
TTC3-213ENST00000469939 RNF25Q96BH1 459 aaPredicted RBP10.21□□□□□ -0.77
TTC3-213ENST00000469939 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
TTC3-213ENST00000469939 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
TTC3-213ENST00000469939 RGL2O15211 777 aa10.19□□□□□ -0.78
TTC3-213ENST00000469939 IER5LQ5T953 404 aa10.18□□□□□ -0.78
TTC3-213ENST00000469939 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
TTC3-213ENST00000469939 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
TTC3-213ENST00000469939 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
TTC3-213ENST00000469939 PDAP1Q13442 181 aaKnown RBP10.13□□□□□ -0.79
TTC3-213ENST00000469939 TAOK2Q9UL54 1235 aa10.13□□□□□ -0.79
TTC3-213ENST00000469939 PLCG2P16885 1265 aa10.12□□□□□ -0.79
TTC3-213ENST00000469939 PSEN1P49768 467 aa10.12□□□□□ -0.79
TTC3-213ENST00000469939 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
TTC3-213ENST00000469939 SLAIN1Q8ND83 568 aa10.09□□□□□ -0.79
TTC3-213ENST00000469939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
TTC3-213ENST00000469939 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
TTC3-213ENST00000469939 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
TTC3-213ENST00000469939 STK25O00506 426 aa10.03□□□□□ -0.8
TTC3-213ENST00000469939 IRX5P78411 483 aaPredicted RBP10.02□□□□□ -0.81
TTC3-213ENST00000469939 BCL11BQ9C0K0 894 aaPredicted RBP10.01□□□□□ -0.81
TTC3-213ENST00000469939 OCEL1Q9H607 264 aa10.01□□□□□ -0.81
TTC3-213ENST00000469939 GOLGA2Q08379 1002 aa10□□□□□ -0.81
TTC3-213ENST00000469939 CABP2Q9NPB3 220 aa10□□□□□ -0.81
TTC3-213ENST00000469939 STK24Q9Y6E0 443 aa10□□□□□ -0.81
TTC3-213ENST00000469939 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
TTC3-213ENST00000469939 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
TTC3-213ENST00000469939 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
TTC3-213ENST00000469939 ST18O60284 1047 aa9.96□□□□□ -0.82
TTC3-213ENST00000469939 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
TTC3-213ENST00000469939 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
TTC3-213ENST00000469939 EFCAB3Q8N7B9 438 aa9.94□□□□□ -0.82
TTC3-213ENST00000469939 SNPHO15079 494 aa9.9□□□□□ -0.82
TTC3-213ENST00000469939 SOX12O15370 315 aa9.89□□□□□ -0.83
TTC3-213ENST00000469939 DNAJC5Q9H3Z4 198 aa9.89□□□□□ -0.83
TTC3-213ENST00000469939 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
TTC3-213ENST00000469939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.88□□□□□ -0.834e-9■■■□□ 18
TTC3-213ENST00000469939 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
TTC3-213ENST00000469939 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
TTC3-213ENST00000469939 PDCD7Q8N8D1 485 aaKnown RBP9.85□□□□□ -0.83
TTC3-213ENST00000469939 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
TTC3-213ENST00000469939 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
TTC3-213ENST00000469939 PHF8Q9UPP1 1060 aa9.84□□□□□ -0.83
TTC3-213ENST00000469939 NLRP6P59044 892 aa9.83□□□□□ -0.84
TTC3-213ENST00000469939 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
TTC3-213ENST00000469939 BBXQ8WY36 941 aaPredicted RBP9.82□□□□□ -0.84
TTC3-213ENST00000469939 MARVELD3Q96A59 401 aa9.82□□□□□ -0.84
TTC3-213ENST00000469939 FBXO22Q8NEZ5 403 aa9.8□□□□□ -0.84
TTC3-213ENST00000469939 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
TTC3-213ENST00000469939 G3V3G9 751 aa9.78□□□□□ -0.84
TTC3-213ENST00000469939 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms