RNA–Protein interactions for RNA: ENST00000469682.1

COL21A1-208, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 778 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-208ENST00000469682 GABBR2O75899 941 aa12.21□□□□□ -0.45
COL21A1-208ENST00000469682 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
COL21A1-208ENST00000469682 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
COL21A1-208ENST00000469682 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
COL21A1-208ENST00000469682 CLCN6P51797 869 aa12.17□□□□□ -0.46
COL21A1-208ENST00000469682 GSE1Q14687 1217 aa12.12□□□□□ -0.47
COL21A1-208ENST00000469682 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-208ENST00000469682 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
COL21A1-208ENST00000469682 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
COL21A1-208ENST00000469682 MAP3K13O43283 966 aa12.06□□□□□ -0.48
COL21A1-208ENST00000469682 PYGBP11216 843 aa12.06□□□□□ -0.48
COL21A1-208ENST00000469682 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
COL21A1-208ENST00000469682 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
COL21A1-208ENST00000469682 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
COL21A1-208ENST00000469682 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
COL21A1-208ENST00000469682 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
COL21A1-208ENST00000469682 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
COL21A1-208ENST00000469682 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
COL21A1-208ENST00000469682 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
COL21A1-208ENST00000469682 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
COL21A1-208ENST00000469682 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
COL21A1-208ENST00000469682 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
COL21A1-208ENST00000469682 TIE1P35590 1138 aa11.86□□□□□ -0.51
COL21A1-208ENST00000469682 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-208ENST00000469682 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-208ENST00000469682 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
COL21A1-208ENST00000469682 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
COL21A1-208ENST00000469682 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
COL21A1-208ENST00000469682 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-208ENST00000469682 PKD2Q13563 968 aa11.81□□□□□ -0.52
COL21A1-208ENST00000469682 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
COL21A1-208ENST00000469682 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
COL21A1-208ENST00000469682 PSEN1P49768 467 aa11.77□□□□□ -0.53
COL21A1-208ENST00000469682 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
COL21A1-208ENST00000469682 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
COL21A1-208ENST00000469682 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
COL21A1-208ENST00000469682 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
COL21A1-208ENST00000469682 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
COL21A1-208ENST00000469682 C7P10643 843 aa11.71□□□□□ -0.53
COL21A1-208ENST00000469682 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
COL21A1-208ENST00000469682 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
COL21A1-208ENST00000469682 RGL2O15211 777 aa11.68□□□□□ -0.54
COL21A1-208ENST00000469682 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
COL21A1-208ENST00000469682 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
COL21A1-208ENST00000469682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-208ENST00000469682 SEC24BO95487 1268 aa11.64□□□□□ -0.55
COL21A1-208ENST00000469682 IER5LQ5T953 404 aa11.64□□□□□ -0.55
COL21A1-208ENST00000469682 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-208ENST00000469682 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
COL21A1-208ENST00000469682 LHX8Q68G74 356 aa11.63□□□□□ -0.55
COL21A1-208ENST00000469682 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
COL21A1-208ENST00000469682 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
COL21A1-208ENST00000469682 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
COL21A1-208ENST00000469682 STK25O00506 426 aa11.57□□□□□ -0.56
COL21A1-208ENST00000469682 PLCG2P16885 1265 aa11.57□□□□□ -0.56
COL21A1-208ENST00000469682 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-208ENST00000469682 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
COL21A1-208ENST00000469682 STK24Q9Y6E0 443 aa11.56□□□□□ -0.56
COL21A1-208ENST00000469682 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
COL21A1-208ENST00000469682 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
COL21A1-208ENST00000469682 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
COL21A1-208ENST00000469682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL21A1-208ENST00000469682 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
COL21A1-208ENST00000469682 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
COL21A1-208ENST00000469682 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
COL21A1-208ENST00000469682 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
COL21A1-208ENST00000469682 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
COL21A1-208ENST00000469682 SOX12O15370 315 aa11.45□□□□□ -0.58
COL21A1-208ENST00000469682 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
COL21A1-208ENST00000469682 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
COL21A1-208ENST00000469682 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
COL21A1-208ENST00000469682 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
COL21A1-208ENST00000469682 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
COL21A1-208ENST00000469682 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-208ENST00000469682 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
COL21A1-208ENST00000469682 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
COL21A1-208ENST00000469682 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-208ENST00000469682 NLRP6P59044 892 aa11.39□□□□□ -0.59
COL21A1-208ENST00000469682 G3V3G9 751 aa11.37□□□□□ -0.59
COL21A1-208ENST00000469682 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
COL21A1-208ENST00000469682 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
COL21A1-208ENST00000469682 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
COL21A1-208ENST00000469682 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
COL21A1-208ENST00000469682 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
COL21A1-208ENST00000469682 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
COL21A1-208ENST00000469682 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
COL21A1-208ENST00000469682 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
COL21A1-208ENST00000469682 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
COL21A1-208ENST00000469682 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
COL21A1-208ENST00000469682 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-208ENST00000469682 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
COL21A1-208ENST00000469682 PPP1R37O75864 691 aa11.2□□□□□ -0.62
COL21A1-208ENST00000469682 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
COL21A1-208ENST00000469682 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-208ENST00000469682 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
COL21A1-208ENST00000469682 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
COL21A1-208ENST00000469682 SNPHO15079 494 aa11.1□□□□□ -0.63
COL21A1-208ENST00000469682 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
COL21A1-208ENST00000469682 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
COL21A1-208ENST00000469682 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms