RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 NUBP1P53384 320 aa15.38■□□□□ 0.05
UBE3C-204ENST00000469336 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
UBE3C-204ENST00000469336 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
UBE3C-204ENST00000469336 DCBLD2Q96PD2 775 aa15.34■□□□□ 0.05
UBE3C-204ENST00000469336 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
UBE3C-204ENST00000469336 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
UBE3C-204ENST00000469336 MAP3K13O43283 966 aa15.24■□□□□ 0.03
UBE3C-204ENST00000469336 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
UBE3C-204ENST00000469336 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
UBE3C-204ENST00000469336 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
UBE3C-204ENST00000469336 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
UBE3C-204ENST00000469336 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
UBE3C-204ENST00000469336 LHX8Q68G74 356 aa15.12■□□□□ 0.01
UBE3C-204ENST00000469336 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
UBE3C-204ENST00000469336 PYGBP11216 843 aa15.1■□□□□ 0.01
UBE3C-204ENST00000469336 PCDHB13Q9Y5F0 798 aa15.1■□□□□ 0.01
UBE3C-204ENST00000469336 ASTLQ6HA08 431 aaPredicted RBP15.08■□□□□ 0
UBE3C-204ENST00000469336 BMP2KQ9NSY1 1161 aaPredicted RBP15.06■□□□□ 0
UBE3C-204ENST00000469336 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
UBE3C-204ENST00000469336 IFNL1Q8IU54 200 aa15.05■□□□□ -0
UBE3C-204ENST00000469336 SPOCK2Q92563 424 aa15.03■□□□□ -0
UBE3C-204ENST00000469336 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
UBE3C-204ENST00000469336 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
UBE3C-204ENST00000469336 GSE1Q14687 1217 aa14.98□□□□□ -0.01
UBE3C-204ENST00000469336 TTLL13PA6NNM8 815 aa14.97□□□□□ -0.01
UBE3C-204ENST00000469336 TIE1P35590 1138 aa14.97□□□□□ -0.01
UBE3C-204ENST00000469336 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
UBE3C-204ENST00000469336 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
UBE3C-204ENST00000469336 METRNQ9UJH8 293 aa14.95□□□□□ -0.02
UBE3C-204ENST00000469336 SLC39A7Q92504 469 aa14.91□□□□□ -0.02
UBE3C-204ENST00000469336 C7P10643 843 aa14.88□□□□□ -0.03
UBE3C-204ENST00000469336 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
UBE3C-204ENST00000469336 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
UBE3C-204ENST00000469336 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
UBE3C-204ENST00000469336 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
UBE3C-204ENST00000469336 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
UBE3C-204ENST00000469336 OTUD5Q96G74 571 aa14.79□□□□□ -0.04
UBE3C-204ENST00000469336 COLQQ9Y215 455 aaPredicted RBP14.79□□□□□ -0.04
UBE3C-204ENST00000469336 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
UBE3C-204ENST00000469336 SEC24BO95487 1268 aa14.73□□□□□ -0.05
UBE3C-204ENST00000469336 PSEN1P49768 467 aa14.7□□□□□ -0.06
UBE3C-204ENST00000469336 IER5LQ5T953 404 aa14.68□□□□□ -0.06
UBE3C-204ENST00000469336 IRX5P78411 483 aaPredicted RBP14.64□□□□□ -0.07
UBE3C-204ENST00000469336 AMER1Q5JTC6 1135 aaPredicted RBP14.64□□□□□ -0.07
UBE3C-204ENST00000469336 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
UBE3C-204ENST00000469336 PLCG2P16885 1265 aa14.6□□□□□ -0.07
UBE3C-204ENST00000469336 RNF25Q96BH1 459 aaPredicted RBP14.6□□□□□ -0.07
UBE3C-204ENST00000469336 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
UBE3C-204ENST00000469336 GOLGA2Q08379 1002 aa14.56□□□□□ -0.08
UBE3C-204ENST00000469336 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
UBE3C-204ENST00000469336 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
UBE3C-204ENST00000469336 CABP2Q9NPB3 220 aa14.55□□□□□ -0.08
UBE3C-204ENST00000469336 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
UBE3C-204ENST00000469336 MAMSTRQ6ZN01 415 aa14.54□□□□□ -0.08
UBE3C-204ENST00000469336 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
UBE3C-204ENST00000469336 RIOK3O14730 519 aaKnown RBP14.5□□□□□ -0.09
UBE3C-204ENST00000469336 PKD2Q13563 968 aa14.48□□□□□ -0.09
UBE3C-204ENST00000469336 PDCD7Q8N8D1 485 aaKnown RBP14.48□□□□□ -0.09
UBE3C-204ENST00000469336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.099e-8■■□□□ 13.9
UBE3C-204ENST00000469336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.46□□□□□ -0.09
UBE3C-204ENST00000469336 ECM2O94769 699 aaPredicted RBP14.46□□□□□ -0.09
UBE3C-204ENST00000469336 ZFP91Q96JP5 570 aaPredicted RBP14.46□□□□□ -0.09
UBE3C-204ENST00000469336 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
UBE3C-204ENST00000469336 DPY19L2Q6NUT2 758 aa14.42□□□□□ -0.1
UBE3C-204ENST00000469336 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
UBE3C-204ENST00000469336 RGL2O15211 777 aa14.38□□□□□ -0.11
UBE3C-204ENST00000469336 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
UBE3C-204ENST00000469336 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
UBE3C-204ENST00000469336 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
UBE3C-204ENST00000469336 LCE2DQ5TA82 110 aaPredicted RBP14.3□□□□□ -0.12
UBE3C-204ENST00000469336 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
UBE3C-204ENST00000469336 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
UBE3C-204ENST00000469336 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
UBE3C-204ENST00000469336 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
UBE3C-204ENST00000469336 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
UBE3C-204ENST00000469336 STK25O00506 426 aa14.25□□□□□ -0.13
UBE3C-204ENST00000469336 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
UBE3C-204ENST00000469336 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
UBE3C-204ENST00000469336 BOLA1Q9Y3E2 137 aa14.23□□□□□ -0.13
UBE3C-204ENST00000469336 POTEMA6NI47 508 aa14.22□□□□□ -0.13
UBE3C-204ENST00000469336 SOX12O15370 315 aa14.21□□□□□ -0.13
UBE3C-204ENST00000469336 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
UBE3C-204ENST00000469336 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
UBE3C-204ENST00000469336 G3V3G9 751 aa14.16□□□□□ -0.14
UBE3C-204ENST00000469336 MFRPQ9BY79 579 aa14.14□□□□□ -0.15
UBE3C-204ENST00000469336 ST18O60284 1047 aa14.13□□□□□ -0.15
UBE3C-204ENST00000469336 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
UBE3C-204ENST00000469336 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
UBE3C-204ENST00000469336 MICALL2Q8IY33 904 aa14.11□□□□□ -0.15
UBE3C-204ENST00000469336 NLRP6P59044 892 aa14.09□□□□□ -0.15
UBE3C-204ENST00000469336 TMEM92Q6UXU6 159 aa14.05□□□□□ -0.16
UBE3C-204ENST00000469336 SNPHO15079 494 aa14.01□□□□□ -0.17
UBE3C-204ENST00000469336 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
UBE3C-204ENST00000469336 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
UBE3C-204ENST00000469336 MARVELD3Q96A59 401 aa13.99□□□□□ -0.17
UBE3C-204ENST00000469336 PPP1R37O75864 691 aa13.97□□□□□ -0.17
UBE3C-204ENST00000469336 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
UBE3C-204ENST00000469336 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
UBE3C-204ENST00000469336 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
UBE3C-204ENST00000469336 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms