RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 HAX1O00165 279 aa15.25■□□□□ 0.03
XRN1-207ENST00000468894 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
XRN1-207ENST00000468894 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
XRN1-207ENST00000468894 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
XRN1-207ENST00000468894 EVX2Q03828 476 aa15.2■□□□□ 0.02
XRN1-207ENST00000468894 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
XRN1-207ENST00000468894 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
XRN1-207ENST00000468894 PYGBP11216 843 aa15.15■□□□□ 0.02
XRN1-207ENST00000468894 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
XRN1-207ENST00000468894 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
XRN1-207ENST00000468894 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
XRN1-207ENST00000468894 KIF12Q96FN5 646 aa15.07■□□□□ 0
XRN1-207ENST00000468894 RGL2O15211 777 aa15.06■□□□□ 0
XRN1-207ENST00000468894 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
XRN1-207ENST00000468894 MAP3K13O43283 966 aa15.03■□□□□ -0
XRN1-207ENST00000468894 PCDHB13Q9Y5F0 798 aa14.98□□□□□ -0.01
XRN1-207ENST00000468894 MS4A3Q96HJ5 214 aa14.96□□□□□ -0.01
XRN1-207ENST00000468894 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.01
XRN1-207ENST00000468894 RIOK3O14730 519 aaKnown RBP14.95□□□□□ -0.02
XRN1-207ENST00000468894 IFNL1Q8IU54 200 aa14.95□□□□□ -0.02
XRN1-207ENST00000468894 PCDHB8Q9UN66 801 aa14.94□□□□□ -0.02
XRN1-207ENST00000468894 ZNF467Q7Z7K2 595 aaPredicted RBP14.93□□□□□ -0.02
XRN1-207ENST00000468894 GALR2O43603 387 aaPredicted RBP14.91□□□□□ -0.02
XRN1-207ENST00000468894 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
XRN1-207ENST00000468894 CLCN6P51797 869 aa14.88□□□□□ -0.03
XRN1-207ENST00000468894 GABBR2O75899 941 aa14.87□□□□□ -0.03
XRN1-207ENST00000468894 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
XRN1-207ENST00000468894 TRPC6Q9Y210 931 aa14.86□□□□□ -0.03
XRN1-207ENST00000468894 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
XRN1-207ENST00000468894 PDAP1Q13442 181 aaKnown RBP14.81□□□□□ -0.04
XRN1-207ENST00000468894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
XRN1-207ENST00000468894 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
XRN1-207ENST00000468894 PSEN1P49768 467 aa14.79□□□□□ -0.04
XRN1-207ENST00000468894 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
XRN1-207ENST00000468894 TIE1P35590 1138 aa14.73□□□□□ -0.05
XRN1-207ENST00000468894 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
XRN1-207ENST00000468894 BMP2KQ9NSY1 1161 aaPredicted RBP14.73□□□□□ -0.05
XRN1-207ENST00000468894 STK25O00506 426 aa14.72□□□□□ -0.05
XRN1-207ENST00000468894 CHGAP10645 457 aaKnown RBP14.72□□□□□ -0.05
XRN1-207ENST00000468894 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.05
XRN1-207ENST00000468894 BCL11BQ9C0K0 894 aaPredicted RBP14.71□□□□□ -0.05
XRN1-207ENST00000468894 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
XRN1-207ENST00000468894 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
XRN1-207ENST00000468894 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
XRN1-207ENST00000468894 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
XRN1-207ENST00000468894 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
XRN1-207ENST00000468894 DCBLD2Q96PD2 775 aa14.62□□□□□ -0.07
XRN1-207ENST00000468894 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
XRN1-207ENST00000468894 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
XRN1-207ENST00000468894 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
XRN1-207ENST00000468894 TRIM35Q9UPQ4 493 aa14.59□□□□□ -0.07
XRN1-207ENST00000468894 NKX1-1Q15270 411 aaPredicted RBP14.55□□□□□ -0.08
XRN1-207ENST00000468894 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
XRN1-207ENST00000468894 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
XRN1-207ENST00000468894 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
XRN1-207ENST00000468894 GOLGA2Q08379 1002 aa14.5□□□□□ -0.09
XRN1-207ENST00000468894 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
XRN1-207ENST00000468894 MFRPQ9BY79 579 aa14.45□□□□□ -0.1
XRN1-207ENST00000468894 IER5LQ5T953 404 aa14.44□□□□□ -0.1
XRN1-207ENST00000468894 SOX12O15370 315 aa14.43□□□□□ -0.1
XRN1-207ENST00000468894 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
XRN1-207ENST00000468894 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
XRN1-207ENST00000468894 FBXO22Q8NEZ5 403 aa14.41□□□□□ -0.1
XRN1-207ENST00000468894 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
XRN1-207ENST00000468894 IRX5P78411 483 aaPredicted RBP14.4□□□□□ -0.1
XRN1-207ENST00000468894 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
XRN1-207ENST00000468894 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
XRN1-207ENST00000468894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■■■■ 36
XRN1-207ENST00000468894 METRNQ9UJH8 293 aa14.38□□□□□ -0.11
XRN1-207ENST00000468894 C7P10643 843 aa14.37□□□□□ -0.11
XRN1-207ENST00000468894 NLRP6P59044 892 aa14.37□□□□□ -0.11
XRN1-207ENST00000468894 MS4A4AQ96JQ5 239 aa14.37□□□□□ -0.11
XRN1-207ENST00000468894 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
XRN1-207ENST00000468894 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
XRN1-207ENST00000468894 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
XRN1-207ENST00000468894 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
XRN1-207ENST00000468894 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
XRN1-207ENST00000468894 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
XRN1-207ENST00000468894 CFAP44Q96MT7 982 aa14.32□□□□□ -0.12
XRN1-207ENST00000468894 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
XRN1-207ENST00000468894 PLCG2P16885 1265 aa14.31□□□□□ -0.12
XRN1-207ENST00000468894 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
XRN1-207ENST00000468894 SEC24BO95487 1268 aa14.29□□□□□ -0.12
XRN1-207ENST00000468894 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.13
XRN1-207ENST00000468894 PPP1R37O75864 691 aa14.26□□□□□ -0.13
XRN1-207ENST00000468894 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
XRN1-207ENST00000468894 BOLA1Q9Y3E2 137 aa14.14□□□□□ -0.15
XRN1-207ENST00000468894 MICALL2Q8IY33 904 aa14.13□□□□□ -0.15
XRN1-207ENST00000468894 POTEJP0CG39 1038 aa14.11□□□□□ -0.15
XRN1-207ENST00000468894 L3MBTL3Q96JM7 780 aaPredicted RBP14.11□□□□□ -0.15
XRN1-207ENST00000468894 TMEM121BQ9BXQ6 578 aaPredicted RBP14.11□□□□□ -0.15
XRN1-207ENST00000468894 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
XRN1-207ENST00000468894 HAP1P54257 671 aaPredicted RBP14.08□□□□□ -0.16
XRN1-207ENST00000468894 G3V3G9 751 aa14.06□□□□□ -0.16
XRN1-207ENST00000468894 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
XRN1-207ENST00000468894 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
XRN1-207ENST00000468894 LHX8Q68G74 356 aa13.97□□□□□ -0.17
XRN1-207ENST00000468894 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
XRN1-207ENST00000468894 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
XRN1-207ENST00000468894 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms