RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 FAM212AQ96EL1 285 aa7.7□□□□□ -1.18
CDHR3-206ENST00000468477 POTEIP0CG38 1075 aa7.69□□□□□ -1.18
CDHR3-206ENST00000468477 PHF12Q96QT6 1004 aa7.67□□□□□ -1.18
CDHR3-206ENST00000468477 RASEFQ8IZ41 740 aa7.65□□□□□ -1.18
CDHR3-206ENST00000468477 CCDC61Q9Y6R9 512 aa7.64□□□□□ -1.19
CDHR3-206ENST00000468477 DCAF8Q5TAQ9 597 aa7.63□□□□□ -1.19
CDHR3-206ENST00000468477 GALR2O43603 387 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-206ENST00000468477 NUBP1P53384 320 aa7.62□□□□□ -1.19
CDHR3-206ENST00000468477 GSE1Q14687 1217 aa7.61□□□□□ -1.19
CDHR3-206ENST00000468477 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
CDHR3-206ENST00000468477 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
CDHR3-206ENST00000468477 SPOCK2Q92563 424 aa7.58□□□□□ -1.2
CDHR3-206ENST00000468477 SGIP1Q9BQI5 828 aa7.58□□□□□ -1.2
CDHR3-206ENST00000468477 PCDHB13Q9Y5F0 798 aa7.57□□□□□ -1.2
CDHR3-206ENST00000468477 MAP3K13O43283 966 aa7.56□□□□□ -1.2
CDHR3-206ENST00000468477 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-206ENST00000468477 RTN4Q9NQC3 1192 aaKnown RBP7.53□□□□□ -1.2
CDHR3-206ENST00000468477 CIZ1Q9ULV3 898 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-206ENST00000468477 PYGBP11216 843 aa7.51□□□□□ -1.21
CDHR3-206ENST00000468477 TIE1P35590 1138 aa7.51□□□□□ -1.21
CDHR3-206ENST00000468477 ASTLQ6HA08 431 aaPredicted RBP7.51□□□□□ -1.21
CDHR3-206ENST00000468477 SLC39A7Q92504 469 aa7.5□□□□□ -1.21
CDHR3-206ENST00000468477 ATMINO43313 823 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-206ENST00000468477 C7P10643 843 aa7.48□□□□□ -1.21
CDHR3-206ENST00000468477 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-206ENST00000468477 AMER1Q5JTC6 1135 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-206ENST00000468477 IFNL1Q8IU54 200 aa7.47□□□□□ -1.21
CDHR3-206ENST00000468477 TRIM41Q8WV44 630 aa7.47□□□□□ -1.21
CDHR3-206ENST00000468477 BMP2KQ9NSY1 1161 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-206ENST00000468477 CHRM1P11229 460 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-206ENST00000468477 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
CDHR3-206ENST00000468477 TTLL13PA6NNM8 815 aa7.44□□□□□ -1.22
CDHR3-206ENST00000468477 SEC24BO95487 1268 aa7.44□□□□□ -1.22
CDHR3-206ENST00000468477 ATN1P54259 1190 aaPredicted RBP7.44□□□□□ -1.22
CDHR3-206ENST00000468477 TMEM106CQ9BVX2 250 aa7.44□□□□□ -1.22
CDHR3-206ENST00000468477 GOLGA2Q08379 1002 aa7.43□□□□□ -1.22
CDHR3-206ENST00000468477 POTEB2H3BUK9 544 aa7.42□□□□□ -1.22
CDHR3-206ENST00000468477 OTUD5Q96G74 571 aa7.42□□□□□ -1.22
CDHR3-206ENST00000468477 PELP1Q8IZL8 1130 aaKnown RBP7.41□□□□□ -1.22
CDHR3-206ENST00000468477 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
CDHR3-206ENST00000468477 TRIM35Q9UPQ4 493 aa7.41□□□□□ -1.22
CDHR3-206ENST00000468477 TRPC6Q9Y210 931 aa7.41□□□□□ -1.22
CDHR3-206ENST00000468477 IER5LQ5T953 404 aa7.4□□□□□ -1.22
CDHR3-206ENST00000468477 MAMSTRQ6ZN01 415 aa7.4□□□□□ -1.22
CDHR3-206ENST00000468477 TAOK2Q9UL54 1235 aa7.37□□□□□ -1.23
CDHR3-206ENST00000468477 PLCG2P16885 1265 aa7.36□□□□□ -1.23
CDHR3-206ENST00000468477 PSEN1P49768 467 aa7.36□□□□□ -1.23
CDHR3-206ENST00000468477 MKRN3Q13064 507 aaKnown RBP7.36□□□□□ -1.23
CDHR3-206ENST00000468477 PDAP1Q13442 181 aaKnown RBP7.36□□□□□ -1.23
CDHR3-206ENST00000468477 SCUBE2Q9NQ36 999 aa7.36□□□□□ -1.23
CDHR3-206ENST00000468477 PLSCR2Q9NRY7 297 aa7.34□□□□□ -1.23
CDHR3-206ENST00000468477 OCEL1Q9H607 264 aa7.31□□□□□ -1.24
CDHR3-206ENST00000468477 RIOK3O14730 519 aaKnown RBP7.3□□□□□ -1.24
CDHR3-206ENST00000468477 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
CDHR3-206ENST00000468477 POTEMA6NI47 508 aa7.28□□□□□ -1.24
CDHR3-206ENST00000468477 VGFO15240 615 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-206ENST00000468477 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-206ENST00000468477 G3V3G9 751 aa7.27□□□□□ -1.25
CDHR3-206ENST00000468477 CABP2Q9NPB3 220 aa7.27□□□□□ -1.25
CDHR3-206ENST00000468477 COLQQ9Y215 455 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-206ENST00000468477 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-206ENST00000468477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDHR3-206ENST00000468477 POTEGQ6S5H5 508 aa7.25□□□□□ -1.25
CDHR3-206ENST00000468477 L3MBTL3Q96JM7 780 aaPredicted RBP7.25□□□□□ -1.25
CDHR3-206ENST00000468477 POTEFA5A3E0 1075 aa7.24□□□□□ -1.25
CDHR3-206ENST00000468477 C3orf67Q6ZVT6 689 aa7.22□□□□□ -1.25
CDHR3-206ENST00000468477 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.22□□□□□ -1.25
CDHR3-206ENST00000468477 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-206ENST00000468477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-206ENST00000468477 ZFP91Q96JP5 570 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-206ENST00000468477 SOX12O15370 315 aa7.19□□□□□ -1.26
CDHR3-206ENST00000468477 SLAIN1Q8ND83 568 aa7.19□□□□□ -1.26
CDHR3-206ENST00000468477 DAXXQ9UER7 740 aaPredicted RBP7.19□□□□□ -1.26
CDHR3-206ENST00000468477 RNF25Q96BH1 459 aaPredicted RBP7.18□□□□□ -1.26
CDHR3-206ENST00000468477 STK25O00506 426 aa7.17□□□□□ -1.26
CDHR3-206ENST00000468477 PKD2Q13563 968 aa7.17□□□□□ -1.26
CDHR3-206ENST00000468477 EFCAB3Q8N7B9 438 aa7.17□□□□□ -1.26
CDHR3-206ENST00000468477 PCDH10Q9P2E7 1040 aa7.17□□□□□ -1.26
CDHR3-206ENST00000468477 STK24Q9Y6E0 443 aa7.17□□□□□ -1.26
CDHR3-206ENST00000468477 PDCD7Q8N8D1 485 aaKnown RBP7.16□□□□□ -1.26
CDHR3-206ENST00000468477 BCL11BQ9C0K0 894 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-206ENST00000468477 SNPHO15079 494 aa7.15□□□□□ -1.26
CDHR3-206ENST00000468477 BOLA1Q9Y3E2 137 aa7.14□□□□□ -1.27
CDHR3-206ENST00000468477 RGL2O15211 777 aa7.13□□□□□ -1.27
CDHR3-206ENST00000468477 FAM163AQ96GL9 167 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-206ENST00000468477 NLRP6P59044 892 aa7.12□□□□□ -1.27
CDHR3-206ENST00000468477 ILDR1Q86SU0 546 aaPredicted RBP7.12□□□□□ -1.27
CDHR3-206ENST00000468477 PRKCSHP14314 528 aaPredicted RBP7.09□□□□□ -1.27
CDHR3-206ENST00000468477 DPY19L2Q6NUT2 758 aa7.09□□□□□ -1.27
CDHR3-206ENST00000468477 PHF8Q9UPP1 1060 aa7.08□□□□□ -1.28
CDHR3-206ENST00000468477 DCAF8L2P0C7V8 631 aa7.06□□□□□ -1.28
CDHR3-206ENST00000468477 CHGAP10645 457 aaKnown RBP7.04□□□□□ -1.28
CDHR3-206ENST00000468477 MICALL2Q8IY33 904 aa7.04□□□□□ -1.28
CDHR3-206ENST00000468477 RYDENQ9NUL5 291 aaKnown RBP7.04□□□□□ -1.28
CDHR3-206ENST00000468477 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-206ENST00000468477 RIMBP2O15034 1052 aa7.02□□□□□ -1.29
CDHR3-206ENST00000468477 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
CDHR3-206ENST00000468477 DOK7Q18PE1 504 aa7.01□□□□□ -1.29
CDHR3-206ENST00000468477 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
CDHR3-206ENST00000468477 MFRPQ9BY79 579 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms