RNA–Protein interactions for RNA: ENST00000468191.1

SYCP1-204, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 396 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-204ENST00000468191 PCDH10Q9P2E7 1040 aa9.08□□□□□ -0.96
SYCP1-204ENST00000468191 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
SYCP1-204ENST00000468191 ASTLQ6HA08 431 aaPredicted RBP9.07□□□□□ -0.96
SYCP1-204ENST00000468191 MNX1P50219 401 aaPredicted RBP9.06□□□□□ -0.96
SYCP1-204ENST00000468191 MS4A3Q96HJ5 214 aa9.05□□□□□ -0.96
SYCP1-204ENST00000468191 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
SYCP1-204ENST00000468191 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
SYCP1-204ENST00000468191 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
SYCP1-204ENST00000468191 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
SYCP1-204ENST00000468191 PELP1Q8IZL8 1130 aaKnown RBP9.01□□□□□ -0.97
SYCP1-204ENST00000468191 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
SYCP1-204ENST00000468191 CCDC61Q9Y6R9 512 aa8.95□□□□□ -0.98
SYCP1-204ENST00000468191 TIE1P35590 1138 aa8.92□□□□□ -0.98
SYCP1-204ENST00000468191 ATN1P54259 1190 aaPredicted RBP8.92□□□□□ -0.98
SYCP1-204ENST00000468191 MIER1Q8N108 512 aa8.92□□□□□ -0.98
SYCP1-204ENST00000468191 KIF12Q96FN5 646 aa8.92□□□□□ -0.98
SYCP1-204ENST00000468191 SEC24BO95487 1268 aa8.91□□□□□ -0.98
SYCP1-204ENST00000468191 FAM163AQ96GL9 167 aaPredicted RBP8.9□□□□□ -0.98
SYCP1-204ENST00000468191 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
SYCP1-204ENST00000468191 BMP2KQ9NSY1 1161 aaPredicted RBP8.86□□□□□ -0.99
SYCP1-204ENST00000468191 MAP3K13O43283 966 aa8.85□□□□□ -0.99
SYCP1-204ENST00000468191 PLCD3Q8N3E9 789 aa8.85□□□□□ -0.99
SYCP1-204ENST00000468191 SGIP1Q9BQI5 828 aa8.85□□□□□ -0.99
SYCP1-204ENST00000468191 FBXO3Q9UK99 471 aa8.85□□□□□ -0.99
SYCP1-204ENST00000468191 POTEJP0CG39 1038 aa8.84□□□□□ -0.99
SYCP1-204ENST00000468191 IER5LQ5T953 404 aa8.83□□□□□ -1
SYCP1-204ENST00000468191 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
SYCP1-204ENST00000468191 TTLL13PA6NNM8 815 aa8.79□□□□□ -1
SYCP1-204ENST00000468191 RASEFQ8IZ41 740 aa8.79□□□□□ -1
SYCP1-204ENST00000468191 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
SYCP1-204ENST00000468191 TRIM35Q9UPQ4 493 aa8.76□□□□□ -1.01
SYCP1-204ENST00000468191 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
SYCP1-204ENST00000468191 VASPP50552 380 aaPredicted RBP8.75□□□□□ -1.01
SYCP1-204ENST00000468191 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
SYCP1-204ENST00000468191 PLCG2P16885 1265 aa8.73□□□□□ -1.01
SYCP1-204ENST00000468191 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
SYCP1-204ENST00000468191 SLAIN1Q8ND83 568 aa8.72□□□□□ -1.01
SYCP1-204ENST00000468191 COLQQ9Y215 455 aaPredicted RBP8.72□□□□□ -1.01
SYCP1-204ENST00000468191 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
SYCP1-204ENST00000468191 SNPHO15079 494 aa8.69□□□□□ -1.02
SYCP1-204ENST00000468191 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
SYCP1-204ENST00000468191 IFNL1Q8IU54 200 aa8.66□□□□□ -1.02
SYCP1-204ENST00000468191 NUBP1P53384 320 aa8.65□□□□□ -1.02
SYCP1-204ENST00000468191 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
SYCP1-204ENST00000468191 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
SYCP1-204ENST00000468191 ST18O60284 1047 aa8.62□□□□□ -1.03
SYCP1-204ENST00000468191 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
SYCP1-204ENST00000468191 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.62□□□□□ -1.03
SYCP1-204ENST00000468191 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
SYCP1-204ENST00000468191 IRX5P78411 483 aaPredicted RBP8.58□□□□□ -1.04
SYCP1-204ENST00000468191 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
SYCP1-204ENST00000468191 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
SYCP1-204ENST00000468191 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
SYCP1-204ENST00000468191 PYGBP11216 843 aa8.53□□□□□ -1.04
SYCP1-204ENST00000468191 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
SYCP1-204ENST00000468191 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
SYCP1-204ENST00000468191 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
SYCP1-204ENST00000468191 MKRN3Q13064 507 aaKnown RBP8.51□□□□□ -1.05
SYCP1-204ENST00000468191 GSE1Q14687 1217 aa8.51□□□□□ -1.05
SYCP1-204ENST00000468191 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
SYCP1-204ENST00000468191 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
SYCP1-204ENST00000468191 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
SYCP1-204ENST00000468191 G3V3G9 751 aa8.46□□□□□ -1.06
SYCP1-204ENST00000468191 EMP3P54852 163 aa8.46□□□□□ -1.06
SYCP1-204ENST00000468191 MARVELD3Q96A59 401 aa8.44□□□□□ -1.06
SYCP1-204ENST00000468191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.06
SYCP1-204ENST00000468191 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
SYCP1-204ENST00000468191 PDCD7Q8N8D1 485 aaKnown RBP8.39□□□□□ -1.07
SYCP1-204ENST00000468191 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
SYCP1-204ENST00000468191 PSEN1P49768 467 aa8.37□□□□□ -1.07
SYCP1-204ENST00000468191 PDAP1Q13442 181 aaKnown RBP8.35□□□□□ -1.07
SYCP1-204ENST00000468191 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
SYCP1-204ENST00000468191 PKD2Q13563 968 aa8.34□□□□□ -1.07
SYCP1-204ENST00000468191 HS3ST6Q96QI5 342 aa8.34□□□□□ -1.07
SYCP1-204ENST00000468191 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
SYCP1-204ENST00000468191 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
SYCP1-204ENST00000468191 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
SYCP1-204ENST00000468191 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
SYCP1-204ENST00000468191 AMER1Q5JTC6 1135 aaPredicted RBP8.3□□□□□ -1.08
SYCP1-204ENST00000468191 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
SYCP1-204ENST00000468191 RTN4Q9NQC3 1192 aaKnown RBP8.28□□□□□ -1.08
SYCP1-204ENST00000468191 CABP2Q9NPB3 220 aa8.27□□□□□ -1.09
SYCP1-204ENST00000468191 ECM2O94769 699 aaPredicted RBP8.26□□□□□ -1.09
SYCP1-204ENST00000468191 ERBB3P21860 1342 aa8.26□□□□□ -1.09
SYCP1-204ENST00000468191 ILDR1Q86SU0 546 aaPredicted RBP8.25□□□□□ -1.09
SYCP1-204ENST00000468191 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
SYCP1-204ENST00000468191 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
SYCP1-204ENST00000468191 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
SYCP1-204ENST00000468191 RNF25Q96BH1 459 aaPredicted RBP8.24□□□□□ -1.09
SYCP1-204ENST00000468191 RGL2O15211 777 aa8.21□□□□□ -1.1
SYCP1-204ENST00000468191 DPY19L2Q6NUT2 758 aa8.2□□□□□ -1.1
SYCP1-204ENST00000468191 POTEB3A0JP26 581 aa8.19□□□□□ -1.1
SYCP1-204ENST00000468191 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
SYCP1-204ENST00000468191 POTEBQ6S5H4 581 aa8.19□□□□□ -1.1
SYCP1-204ENST00000468191 RNF166Q96A37 237 aaPredicted RBP8.19□□□□□ -1.1
SYCP1-204ENST00000468191 ZSWIM6Q9HCJ5 1215 aa8.19□□□□□ -1.1
SYCP1-204ENST00000468191 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
SYCP1-204ENST00000468191 PTGER2P43116 358 aa8.17□□□□□ -1.1
SYCP1-204ENST00000468191 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
SYCP1-204ENST00000468191 VARS2Q5ST30 1063 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms