RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
RBM39-226ENST00000468086 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
RBM39-226ENST00000468086 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
RBM39-226ENST00000468086 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
RBM39-226ENST00000468086 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
RBM39-226ENST00000468086 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
RBM39-226ENST00000468086 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
RBM39-226ENST00000468086 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
RBM39-226ENST00000468086 MAP3K13O43283 966 aa13.87□□□□□ -0.19
RBM39-226ENST00000468086 NUBP1P53384 320 aa13.87□□□□□ -0.19
RBM39-226ENST00000468086 METRNQ9UJH8 293 aa13.85□□□□□ -0.19
RBM39-226ENST00000468086 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
RBM39-226ENST00000468086 C7P10643 843 aa13.83□□□□□ -0.2
RBM39-226ENST00000468086 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
RBM39-226ENST00000468086 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
RBM39-226ENST00000468086 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
RBM39-226ENST00000468086 ATN1P54259 1190 aaPredicted RBP13.8□□□□□ -0.2
RBM39-226ENST00000468086 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
RBM39-226ENST00000468086 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
RBM39-226ENST00000468086 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
RBM39-226ENST00000468086 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
RBM39-226ENST00000468086 TIE1P35590 1138 aa13.77□□□□□ -0.21
RBM39-226ENST00000468086 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
RBM39-226ENST00000468086 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
RBM39-226ENST00000468086 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
RBM39-226ENST00000468086 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
RBM39-226ENST00000468086 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
RBM39-226ENST00000468086 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
RBM39-226ENST00000468086 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
RBM39-226ENST00000468086 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
RBM39-226ENST00000468086 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
RBM39-226ENST00000468086 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
RBM39-226ENST00000468086 GSE1Q14687 1217 aa13.6□□□□□ -0.23
RBM39-226ENST00000468086 SEC24BO95487 1268 aa13.59□□□□□ -0.23
RBM39-226ENST00000468086 PYGBP11216 843 aa13.59□□□□□ -0.23
RBM39-226ENST00000468086 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
RBM39-226ENST00000468086 IER5LQ5T953 404 aa13.57□□□□□ -0.24
RBM39-226ENST00000468086 SCUBE2Q9NQ36 999 aa13.57□□□□□ -0.24
RBM39-226ENST00000468086 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
RBM39-226ENST00000468086 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
RBM39-226ENST00000468086 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
RBM39-226ENST00000468086 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
RBM39-226ENST00000468086 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
RBM39-226ENST00000468086 PLCG2P16885 1265 aa13.43□□□□□ -0.26
RBM39-226ENST00000468086 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
RBM39-226ENST00000468086 POTEMA6NI47 508 aa13.41□□□□□ -0.26
RBM39-226ENST00000468086 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
RBM39-226ENST00000468086 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
RBM39-226ENST00000468086 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
RBM39-226ENST00000468086 OCEL1Q9H607 264 aa13.35□□□□□ -0.27
RBM39-226ENST00000468086 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
RBM39-226ENST00000468086 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
RBM39-226ENST00000468086 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
RBM39-226ENST00000468086 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
RBM39-226ENST00000468086 PSEN1P49768 467 aa13.28□□□□□ -0.28
RBM39-226ENST00000468086 PKD2Q13563 968 aa13.28□□□□□ -0.28
RBM39-226ENST00000468086 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
RBM39-226ENST00000468086 PDAP1Q13442 181 aaKnown RBP13.25□□□□□ -0.29
RBM39-226ENST00000468086 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
RBM39-226ENST00000468086 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
RBM39-226ENST00000468086 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
RBM39-226ENST00000468086 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
RBM39-226ENST00000468086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
RBM39-226ENST00000468086 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
RBM39-226ENST00000468086 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
RBM39-226ENST00000468086 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
RBM39-226ENST00000468086 L3MBTL3Q96JM7 780 aaPredicted RBP13.15□□□□□ -0.3
RBM39-226ENST00000468086 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
RBM39-226ENST00000468086 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
RBM39-226ENST00000468086 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
RBM39-226ENST00000468086 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
RBM39-226ENST00000468086 ST18O60284 1047 aa13.1□□□□□ -0.31
RBM39-226ENST00000468086 SNPHO15079 494 aa13.08□□□□□ -0.32
RBM39-226ENST00000468086 RGL2O15211 777 aa13.08□□□□□ -0.32
RBM39-226ENST00000468086 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
RBM39-226ENST00000468086 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
RBM39-226ENST00000468086 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
RBM39-226ENST00000468086 G3V3G9 751 aa13.01□□□□□ -0.33
RBM39-226ENST00000468086 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
RBM39-226ENST00000468086 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
RBM39-226ENST00000468086 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
RBM39-226ENST00000468086 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
RBM39-226ENST00000468086 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
RBM39-226ENST00000468086 BOLA1Q9Y3E2 137 aa12.97□□□□□ -0.33
RBM39-226ENST00000468086 STK25O00506 426 aa12.91□□□□□ -0.34
RBM39-226ENST00000468086 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
RBM39-226ENST00000468086 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
RBM39-226ENST00000468086 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
RBM39-226ENST00000468086 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
RBM39-226ENST00000468086 SOX12O15370 315 aa12.86□□□□□ -0.35
RBM39-226ENST00000468086 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
RBM39-226ENST00000468086 EMP3P54852 163 aa12.83□□□□□ -0.36
RBM39-226ENST00000468086 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
RBM39-226ENST00000468086 MS4A4AQ96JQ5 239 aa12.82□□□□□ -0.36
RBM39-226ENST00000468086 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
RBM39-226ENST00000468086 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
RBM39-226ENST00000468086 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
RBM39-226ENST00000468086 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
RBM39-226ENST00000468086 ZNF710Q8N1W2 664 aa12.75□□□□□ -0.37
RBM39-226ENST00000468086 NLRP6P59044 892 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms