RNA–Protein interactions for RNA: ENST00000467686.1

LMO7-209, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-209ENST00000467686 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
LMO7-209ENST00000467686 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
LMO7-209ENST00000467686 NUBP1P53384 320 aa11.17□□□□□ -0.62
LMO7-209ENST00000467686 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
LMO7-209ENST00000467686 LHX8Q68G74 356 aa11.14□□□□□ -0.63
LMO7-209ENST00000467686 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
LMO7-209ENST00000467686 MAP3K13O43283 966 aa11.11□□□□□ -0.63
LMO7-209ENST00000467686 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
LMO7-209ENST00000467686 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
LMO7-209ENST00000467686 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
LMO7-209ENST00000467686 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
LMO7-209ENST00000467686 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
LMO7-209ENST00000467686 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
LMO7-209ENST00000467686 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
LMO7-209ENST00000467686 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
LMO7-209ENST00000467686 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
LMO7-209ENST00000467686 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
LMO7-209ENST00000467686 BMP2KQ9NSY1 1161 aaPredicted RBP10.98□□□□□ -0.65
LMO7-209ENST00000467686 PYGBP11216 843 aa10.97□□□□□ -0.65
LMO7-209ENST00000467686 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
LMO7-209ENST00000467686 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
LMO7-209ENST00000467686 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
LMO7-209ENST00000467686 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
LMO7-209ENST00000467686 TIE1P35590 1138 aa10.94□□□□□ -0.66
LMO7-209ENST00000467686 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
LMO7-209ENST00000467686 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
LMO7-209ENST00000467686 C7P10643 843 aa10.92□□□□□ -0.66
LMO7-209ENST00000467686 GSE1Q14687 1217 aa10.9□□□□□ -0.66
LMO7-209ENST00000467686 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
LMO7-209ENST00000467686 PCDHB8Q9UN66 801 aa10.87□□□□□ -0.67
LMO7-209ENST00000467686 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
LMO7-209ENST00000467686 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
LMO7-209ENST00000467686 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
LMO7-209ENST00000467686 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
LMO7-209ENST00000467686 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
LMO7-209ENST00000467686 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
LMO7-209ENST00000467686 COLQQ9Y215 455 aaPredicted RBP10.8□□□□□ -0.68
LMO7-209ENST00000467686 SEC24BO95487 1268 aa10.79□□□□□ -0.68
LMO7-209ENST00000467686 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
LMO7-209ENST00000467686 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
LMO7-209ENST00000467686 IER5LQ5T953 404 aa10.75□□□□□ -0.69
LMO7-209ENST00000467686 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
LMO7-209ENST00000467686 PSEN1P49768 467 aa10.7□□□□□ -0.7
LMO7-209ENST00000467686 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
LMO7-209ENST00000467686 PLCG2P16885 1265 aa10.68□□□□□ -0.7
LMO7-209ENST00000467686 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
LMO7-209ENST00000467686 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
LMO7-209ENST00000467686 PDAP1Q13442 181 aaKnown RBP10.65□□□□□ -0.7
LMO7-209ENST00000467686 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
LMO7-209ENST00000467686 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
LMO7-209ENST00000467686 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
LMO7-209ENST00000467686 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
LMO7-209ENST00000467686 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
LMO7-209ENST00000467686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.56□□□□□ -0.72
LMO7-209ENST00000467686 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
LMO7-209ENST00000467686 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
LMO7-209ENST00000467686 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
LMO7-209ENST00000467686 FAM163AQ96GL9 167 aaPredicted RBP10.53□□□□□ -0.72
LMO7-209ENST00000467686 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
LMO7-209ENST00000467686 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
LMO7-209ENST00000467686 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
LMO7-209ENST00000467686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
LMO7-209ENST00000467686 POTEMA6NI47 508 aa10.47□□□□□ -0.73
LMO7-209ENST00000467686 ILDR1Q86SU0 546 aaPredicted RBP10.47□□□□□ -0.73
LMO7-209ENST00000467686 EFCAB3Q8N7B9 438 aa10.47□□□□□ -0.73
LMO7-209ENST00000467686 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
LMO7-209ENST00000467686 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.47□□□□□ -0.73
LMO7-209ENST00000467686 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
LMO7-209ENST00000467686 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
LMO7-209ENST00000467686 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
LMO7-209ENST00000467686 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
LMO7-209ENST00000467686 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
LMO7-209ENST00000467686 PKD2Q13563 968 aa10.43□□□□□ -0.74
LMO7-209ENST00000467686 C3orf67Q6ZVT6 689 aa10.42□□□□□ -0.74
LMO7-209ENST00000467686 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
LMO7-209ENST00000467686 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
LMO7-209ENST00000467686 G3V3G9 751 aa10.37□□□□□ -0.75
LMO7-209ENST00000467686 RGL2O15211 777 aa10.37□□□□□ -0.75
LMO7-209ENST00000467686 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
LMO7-209ENST00000467686 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
LMO7-209ENST00000467686 SOX12O15370 315 aa10.35□□□□□ -0.75
LMO7-209ENST00000467686 ST18O60284 1047 aa10.35□□□□□ -0.75
LMO7-209ENST00000467686 STK24Q9Y6E0 443 aa10.35□□□□□ -0.75
LMO7-209ENST00000467686 PHF8Q9UPP1 1060 aa10.34□□□□□ -0.75
LMO7-209ENST00000467686 STK25O00506 426 aa10.32□□□□□ -0.76
LMO7-209ENST00000467686 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
LMO7-209ENST00000467686 SNPHO15079 494 aa10.3□□□□□ -0.76
LMO7-209ENST00000467686 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
LMO7-209ENST00000467686 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
LMO7-209ENST00000467686 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
LMO7-209ENST00000467686 NLRP6P59044 892 aa10.25□□□□□ -0.77
LMO7-209ENST00000467686 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
LMO7-209ENST00000467686 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
LMO7-209ENST00000467686 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
LMO7-209ENST00000467686 MARVELD3Q96A59 401 aa10.23□□□□□ -0.77
LMO7-209ENST00000467686 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
LMO7-209ENST00000467686 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
LMO7-209ENST00000467686 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
LMO7-209ENST00000467686 EMP3P54852 163 aa10.14□□□□□ -0.79
LMO7-209ENST00000467686 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms