RNA–Protein interactions for RNA: ENST00000467677.1

LINC01393-204, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2

Gene LINC01393, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-204ENST00000467677 DCBLD2Q96PD2 775 aa16.2■□□□□ 0.18
LINC01393-204ENST00000467677 NUBP1P53384 320 aa16.18■□□□□ 0.18
LINC01393-204ENST00000467677 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
LINC01393-204ENST00000467677 MS4A3Q96HJ5 214 aa16.14■□□□□ 0.17
LINC01393-204ENST00000467677 KIF12Q96FN5 646 aa16.1■□□□□ 0.17
LINC01393-204ENST00000467677 FAM212AQ96EL1 285 aa16.03■□□□□ 0.16
LINC01393-204ENST00000467677 MAP3K13O43283 966 aa16.02■□□□□ 0.16
LINC01393-204ENST00000467677 KLHL34Q8N239 644 aa16■□□□□ 0.15
LINC01393-204ENST00000467677 LHX8Q68G74 356 aa15.99■□□□□ 0.15
LINC01393-204ENST00000467677 ASTLQ6HA08 431 aaPredicted RBP15.95■□□□□ 0.14
LINC01393-204ENST00000467677 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
LINC01393-204ENST00000467677 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
LINC01393-204ENST00000467677 ATMINO43313 823 aaPredicted RBP15.93■□□□□ 0.14
LINC01393-204ENST00000467677 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
LINC01393-204ENST00000467677 IFNLR1Q8IU57 520 aaPredicted RBP15.91■□□□□ 0.14
LINC01393-204ENST00000467677 SGIP1Q9BQI5 828 aa15.89■□□□□ 0.13
LINC01393-204ENST00000467677 PCDHB13Q9Y5F0 798 aa15.89■□□□□ 0.13
LINC01393-204ENST00000467677 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
LINC01393-204ENST00000467677 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
LINC01393-204ENST00000467677 TIE1P35590 1138 aa15.83■□□□□ 0.12
LINC01393-204ENST00000467677 IFNL1Q8IU54 200 aa15.83■□□□□ 0.12
LINC01393-204ENST00000467677 PYGBP11216 843 aa15.82■□□□□ 0.12
LINC01393-204ENST00000467677 GSE1Q14687 1217 aa15.79■□□□□ 0.12
LINC01393-204ENST00000467677 SLC39A7Q92504 469 aa15.79■□□□□ 0.12
LINC01393-204ENST00000467677 SPOCK2Q92563 424 aa15.79■□□□□ 0.12
LINC01393-204ENST00000467677 METRNQ9UJH8 293 aa15.79■□□□□ 0.12
LINC01393-204ENST00000467677 TTLL13PA6NNM8 815 aa15.77■□□□□ 0.12
LINC01393-204ENST00000467677 POTEB2H3BUK9 544 aa15.75■□□□□ 0.11
LINC01393-204ENST00000467677 C7P10643 843 aa15.75■□□□□ 0.11
LINC01393-204ENST00000467677 PCDHB8Q9UN66 801 aa15.68■□□□□ 0.1
LINC01393-204ENST00000467677 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
LINC01393-204ENST00000467677 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
LINC01393-204ENST00000467677 CHRM1P11229 460 aaPredicted RBP15.65■□□□□ 0.1
LINC01393-204ENST00000467677 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
LINC01393-204ENST00000467677 POTEFA5A3E0 1075 aa15.63■□□□□ 0.09
LINC01393-204ENST00000467677 OTUD5Q96G74 571 aa15.61■□□□□ 0.09
LINC01393-204ENST00000467677 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
LINC01393-204ENST00000467677 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
LINC01393-204ENST00000467677 COLQQ9Y215 455 aaPredicted RBP15.57■□□□□ 0.08
LINC01393-204ENST00000467677 IER5LQ5T953 404 aa15.56■□□□□ 0.08
LINC01393-204ENST00000467677 SEC24BO95487 1268 aa15.52■□□□□ 0.08
LINC01393-204ENST00000467677 PSEN1P49768 467 aa15.45■□□□□ 0.06
LINC01393-204ENST00000467677 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
LINC01393-204ENST00000467677 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
LINC01393-204ENST00000467677 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
LINC01393-204ENST00000467677 PDAP1Q13442 181 aaKnown RBP15.42■□□□□ 0.06
LINC01393-204ENST00000467677 PLCG2P16885 1265 aa15.41■□□□□ 0.06
LINC01393-204ENST00000467677 SCUBE2Q9NQ36 999 aa15.39■□□□□ 0.05
LINC01393-204ENST00000467677 OCEL1Q9H607 264 aa15.35■□□□□ 0.05
LINC01393-204ENST00000467677 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
LINC01393-204ENST00000467677 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
LINC01393-204ENST00000467677 RNF25Q96BH1 459 aaPredicted RBP15.31■□□□□ 0.04
LINC01393-204ENST00000467677 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
LINC01393-204ENST00000467677 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
LINC01393-204ENST00000467677 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
LINC01393-204ENST00000467677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC01393-204ENST00000467677 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
LINC01393-204ENST00000467677 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
LINC01393-204ENST00000467677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
LINC01393-204ENST00000467677 PKD2Q13563 968 aa15.15■□□□□ 0.02
LINC01393-204ENST00000467677 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
LINC01393-204ENST00000467677 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
LINC01393-204ENST00000467677 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
LINC01393-204ENST00000467677 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
LINC01393-204ENST00000467677 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
LINC01393-204ENST00000467677 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
LINC01393-204ENST00000467677 LCE2DQ5TA82 110 aaPredicted RBP15.1■□□□□ 0.01
LINC01393-204ENST00000467677 L3MBTL3Q96JM7 780 aaPredicted RBP15.1■□□□□ 0.01
LINC01393-204ENST00000467677 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
LINC01393-204ENST00000467677 FAM163AQ96GL9 167 aaPredicted RBP15.07■□□□□ 0
LINC01393-204ENST00000467677 POTEMA6NI47 508 aa15.04■□□□□ -0
LINC01393-204ENST00000467677 RGL2O15211 777 aa15.04■□□□□ -0
LINC01393-204ENST00000467677 C3orf67Q6ZVT6 689 aa15.04■□□□□ -0
LINC01393-204ENST00000467677 POTEGQ6S5H5 508 aa15.02■□□□□ -0
LINC01393-204ENST00000467677 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
LINC01393-204ENST00000467677 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
LINC01393-204ENST00000467677 BOLA1Q9Y3E2 137 aa14.99□□□□□ -0.01
LINC01393-204ENST00000467677 SOX12O15370 315 aa14.98□□□□□ -0.01
LINC01393-204ENST00000467677 STK24Q9Y6E0 443 aa14.96□□□□□ -0.01
LINC01393-204ENST00000467677 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
LINC01393-204ENST00000467677 G3V3G9 751 aa14.94□□□□□ -0.02
LINC01393-204ENST00000467677 STK25O00506 426 aa14.94□□□□□ -0.02
LINC01393-204ENST00000467677 MS4A4AQ96JQ5 239 aa14.94□□□□□ -0.02
LINC01393-204ENST00000467677 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
LINC01393-204ENST00000467677 ST18O60284 1047 aa14.9□□□□□ -0.02
LINC01393-204ENST00000467677 SNPHO15079 494 aa14.86□□□□□ -0.03
LINC01393-204ENST00000467677 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
LINC01393-204ENST00000467677 FBXO22Q8NEZ5 403 aa14.85□□□□□ -0.03
LINC01393-204ENST00000467677 NLRP6P59044 892 aa14.84□□□□□ -0.03
LINC01393-204ENST00000467677 MFRPQ9BY79 579 aa14.84□□□□□ -0.03
LINC01393-204ENST00000467677 TMEM92Q6UXU6 159 aa14.75□□□□□ -0.05
LINC01393-204ENST00000467677 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
LINC01393-204ENST00000467677 HOXB3P14651 431 aaPredicted RBP14.71□□□□□ -0.05
LINC01393-204ENST00000467677 HS6ST3Q8IZP7 471 aa14.71□□□□□ -0.05
LINC01393-204ENST00000467677 MARVELD3Q96A59 401 aa14.69□□□□□ -0.06
LINC01393-204ENST00000467677 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
LINC01393-204ENST00000467677 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
LINC01393-204ENST00000467677 PPP1R37O75864 691 aa14.6□□□□□ -0.07
LINC01393-204ENST00000467677 EMP3P54852 163 aa14.6□□□□□ -0.07
LINC01393-204ENST00000467677 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms