RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 CLCN6P51797 869 aa11.15□□□□□ -0.62
SMC4-208ENST00000467468 EVX2Q03828 476 aa11.14□□□□□ -0.63
SMC4-208ENST00000467468 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
SMC4-208ENST00000467468 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
SMC4-208ENST00000467468 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
SMC4-208ENST00000467468 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
SMC4-208ENST00000467468 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
SMC4-208ENST00000467468 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
SMC4-208ENST00000467468 GABBR2O75899 941 aa11.01□□□□□ -0.65
SMC4-208ENST00000467468 PYGBP11216 843 aa11.01□□□□□ -0.65
SMC4-208ENST00000467468 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
SMC4-208ENST00000467468 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
SMC4-208ENST00000467468 MAP3K13O43283 966 aa10.98□□□□□ -0.65
SMC4-208ENST00000467468 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
SMC4-208ENST00000467468 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
SMC4-208ENST00000467468 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
SMC4-208ENST00000467468 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
SMC4-208ENST00000467468 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
SMC4-208ENST00000467468 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
SMC4-208ENST00000467468 PKD2Q13563 968 aa10.92□□□□□ -0.66
SMC4-208ENST00000467468 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
SMC4-208ENST00000467468 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
SMC4-208ENST00000467468 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
SMC4-208ENST00000467468 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
SMC4-208ENST00000467468 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
SMC4-208ENST00000467468 TIE1P35590 1138 aa10.85□□□□□ -0.67
SMC4-208ENST00000467468 PDAP1Q13442 181 aaKnown RBP10.83□□□□□ -0.68
SMC4-208ENST00000467468 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
SMC4-208ENST00000467468 PSEN1P49768 467 aa10.79□□□□□ -0.68
SMC4-208ENST00000467468 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
SMC4-208ENST00000467468 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
SMC4-208ENST00000467468 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
SMC4-208ENST00000467468 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
SMC4-208ENST00000467468 TRPC6Q9Y210 931 aa10.78□□□□□ -0.68
SMC4-208ENST00000467468 RGL2O15211 777 aa10.77□□□□□ -0.69
SMC4-208ENST00000467468 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
SMC4-208ENST00000467468 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
SMC4-208ENST00000467468 ATMINO43313 823 aaPredicted RBP10.76□□□□□ -0.69
SMC4-208ENST00000467468 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
SMC4-208ENST00000467468 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
SMC4-208ENST00000467468 POTEIP0CG38 1075 aa10.71□□□□□ -0.69
SMC4-208ENST00000467468 ATN1P54259 1190 aaPredicted RBP10.71□□□□□ -0.69
SMC4-208ENST00000467468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
SMC4-208ENST00000467468 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
SMC4-208ENST00000467468 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
SMC4-208ENST00000467468 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
SMC4-208ENST00000467468 STK25O00506 426 aa10.67□□□□□ -0.7
SMC4-208ENST00000467468 IER5LQ5T953 404 aa10.66□□□□□ -0.7
SMC4-208ENST00000467468 C7P10643 843 aa10.65□□□□□ -0.7
SMC4-208ENST00000467468 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
SMC4-208ENST00000467468 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
SMC4-208ENST00000467468 CABP2Q9NPB3 220 aa10.65□□□□□ -0.7
SMC4-208ENST00000467468 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
SMC4-208ENST00000467468 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
SMC4-208ENST00000467468 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
SMC4-208ENST00000467468 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
SMC4-208ENST00000467468 SEC24BO95487 1268 aa10.6□□□□□ -0.71
SMC4-208ENST00000467468 CHGAP10645 457 aaKnown RBP10.6□□□□□ -0.71
SMC4-208ENST00000467468 PLCG2P16885 1265 aa10.57□□□□□ -0.72
SMC4-208ENST00000467468 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
SMC4-208ENST00000467468 SOX12O15370 315 aa10.55□□□□□ -0.72
SMC4-208ENST00000467468 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
SMC4-208ENST00000467468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.728e-8■■■■■ 47.4
SMC4-208ENST00000467468 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
SMC4-208ENST00000467468 NLRP6P59044 892 aa10.5□□□□□ -0.73
SMC4-208ENST00000467468 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
SMC4-208ENST00000467468 RYDENQ9NUL5 291 aaKnown RBP10.48□□□□□ -0.73
SMC4-208ENST00000467468 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
SMC4-208ENST00000467468 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
SMC4-208ENST00000467468 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
SMC4-208ENST00000467468 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
SMC4-208ENST00000467468 G3V3G9 751 aa10.45□□□□□ -0.74
SMC4-208ENST00000467468 PDCD7Q8N8D1 485 aaKnown RBP10.45□□□□□ -0.74
SMC4-208ENST00000467468 LHX8Q68G74 356 aa10.44□□□□□ -0.74
SMC4-208ENST00000467468 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
SMC4-208ENST00000467468 MAMSTRQ6ZN01 415 aa10.43□□□□□ -0.74
SMC4-208ENST00000467468 MFRPQ9BY79 579 aa10.43□□□□□ -0.74
SMC4-208ENST00000467468 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
SMC4-208ENST00000467468 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
SMC4-208ENST00000467468 FBXO22Q8NEZ5 403 aa10.4□□□□□ -0.74
SMC4-208ENST00000467468 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
SMC4-208ENST00000467468 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
SMC4-208ENST00000467468 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
SMC4-208ENST00000467468 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
SMC4-208ENST00000467468 POTEB2H3BUK9 544 aa10.35□□□□□ -0.75
SMC4-208ENST00000467468 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
SMC4-208ENST00000467468 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
SMC4-208ENST00000467468 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.32□□□□□ -0.76
SMC4-208ENST00000467468 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
SMC4-208ENST00000467468 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
SMC4-208ENST00000467468 POTEJP0CG39 1038 aa10.29□□□□□ -0.76
SMC4-208ENST00000467468 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
SMC4-208ENST00000467468 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
SMC4-208ENST00000467468 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
SMC4-208ENST00000467468 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
SMC4-208ENST00000467468 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
SMC4-208ENST00000467468 PPP1R37O75864 691 aa10.24□□□□□ -0.77
SMC4-208ENST00000467468 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
SMC4-208ENST00000467468 SLAIN1Q8ND83 568 aa10.23□□□□□ -0.77
SMC4-208ENST00000467468 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms