RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
PRPF40A-205ENST00000467114 NUBP1P53384 320 aa15.14■□□□□ 0.01
PRPF40A-205ENST00000467114 MS4A3Q96HJ5 214 aa15.11■□□□□ 0.01
PRPF40A-205ENST00000467114 KIF12Q96FN5 646 aa15.09■□□□□ 0.01
PRPF40A-205ENST00000467114 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
PRPF40A-205ENST00000467114 LHX8Q68G74 356 aa15.06■□□□□ 0
PRPF40A-205ENST00000467114 MAP3K13O43283 966 aa15□□□□□ -0.01
PRPF40A-205ENST00000467114 FAM212AQ96EL1 285 aa15□□□□□ -0.01
PRPF40A-205ENST00000467114 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-205ENST00000467114 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-205ENST00000467114 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-205ENST00000467114 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
PRPF40A-205ENST00000467114 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
PRPF40A-205ENST00000467114 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
PRPF40A-205ENST00000467114 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
PRPF40A-205ENST00000467114 PCDHB13Q9Y5F0 798 aa14.88□□□□□ -0.03
PRPF40A-205ENST00000467114 TIE1P35590 1138 aa14.87□□□□□ -0.03
PRPF40A-205ENST00000467114 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-205ENST00000467114 ATN1P54259 1190 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-205ENST00000467114 IFNLR1Q8IU57 520 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-205ENST00000467114 SLC39A7Q92504 469 aa14.83□□□□□ -0.04
PRPF40A-205ENST00000467114 C7P10643 843 aa14.82□□□□□ -0.04
PRPF40A-205ENST00000467114 IFNL1Q8IU54 200 aa14.81□□□□□ -0.04
PRPF40A-205ENST00000467114 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
PRPF40A-205ENST00000467114 GSE1Q14687 1217 aa14.79□□□□□ -0.04
PRPF40A-205ENST00000467114 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
PRPF40A-205ENST00000467114 TTLL13PA6NNM8 815 aa14.77□□□□□ -0.05
PRPF40A-205ENST00000467114 PYGBP11216 843 aa14.77□□□□□ -0.05
PRPF40A-205ENST00000467114 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
PRPF40A-205ENST00000467114 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-205ENST00000467114 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
PRPF40A-205ENST00000467114 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
PRPF40A-205ENST00000467114 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
PRPF40A-205ENST00000467114 POTEFA5A3E0 1075 aa14.65□□□□□ -0.06
PRPF40A-205ENST00000467114 PCDHB8Q9UN66 801 aa14.65□□□□□ -0.06
PRPF40A-205ENST00000467114 IER5LQ5T953 404 aa14.63□□□□□ -0.07
PRPF40A-205ENST00000467114 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
PRPF40A-205ENST00000467114 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-205ENST00000467114 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-205ENST00000467114 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
PRPF40A-205ENST00000467114 SEC24BO95487 1268 aa14.55□□□□□ -0.08
PRPF40A-205ENST00000467114 MAMSTRQ6ZN01 415 aa14.54□□□□□ -0.08
PRPF40A-205ENST00000467114 IRX5P78411 483 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-205ENST00000467114 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
PRPF40A-205ENST00000467114 PSEN1P49768 467 aa14.46□□□□□ -0.09
PRPF40A-205ENST00000467114 SCUBE2Q9NQ36 999 aa14.46□□□□□ -0.09
PRPF40A-205ENST00000467114 PLCG2P16885 1265 aa14.43□□□□□ -0.1
PRPF40A-205ENST00000467114 PDAP1Q13442 181 aaKnown RBP14.43□□□□□ -0.1
PRPF40A-205ENST00000467114 OCEL1Q9H607 264 aa14.41□□□□□ -0.1
PRPF40A-205ENST00000467114 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
PRPF40A-205ENST00000467114 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-205ENST00000467114 PDCD7Q8N8D1 485 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-205ENST00000467114 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-205ENST00000467114 RNF25Q96BH1 459 aaPredicted RBP14.27□□□□□ -0.13
PRPF40A-205ENST00000467114 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
PRPF40A-205ENST00000467114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.132e-13■■■□□ 15.4
PRPF40A-205ENST00000467114 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-205ENST00000467114 SLAIN1Q8ND83 568 aa14.2□□□□□ -0.14
PRPF40A-205ENST00000467114 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-205ENST00000467114 LCE2DQ5TA82 110 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-205ENST00000467114 L3MBTL3Q96JM7 780 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-205ENST00000467114 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-205ENST00000467114 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-205ENST00000467114 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-205ENST00000467114 POTEMA6NI47 508 aa14.14□□□□□ -0.15
PRPF40A-205ENST00000467114 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-205ENST00000467114 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
PRPF40A-205ENST00000467114 DPY19L2Q6NUT2 758 aa14.12□□□□□ -0.15
PRPF40A-205ENST00000467114 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
PRPF40A-205ENST00000467114 PKD2Q13563 968 aa14.11□□□□□ -0.15
PRPF40A-205ENST00000467114 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
PRPF40A-205ENST00000467114 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
PRPF40A-205ENST00000467114 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
PRPF40A-205ENST00000467114 SOX12O15370 315 aa14.05□□□□□ -0.16
PRPF40A-205ENST00000467114 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
PRPF40A-205ENST00000467114 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
PRPF40A-205ENST00000467114 G3V3G9 751 aa13.99□□□□□ -0.17
PRPF40A-205ENST00000467114 SNPHO15079 494 aa13.99□□□□□ -0.17
PRPF40A-205ENST00000467114 RGL2O15211 777 aa13.99□□□□□ -0.17
PRPF40A-205ENST00000467114 ST18O60284 1047 aa13.99□□□□□ -0.17
PRPF40A-205ENST00000467114 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-205ENST00000467114 MS4A4AQ96JQ5 239 aa13.96□□□□□ -0.17
PRPF40A-205ENST00000467114 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
PRPF40A-205ENST00000467114 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
PRPF40A-205ENST00000467114 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
PRPF40A-205ENST00000467114 STK25O00506 426 aa13.93□□□□□ -0.18
PRPF40A-205ENST00000467114 NLRP6P59044 892 aa13.89□□□□□ -0.19
PRPF40A-205ENST00000467114 MICALL2Q8IY33 904 aa13.89□□□□□ -0.19
PRPF40A-205ENST00000467114 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
PRPF40A-205ENST00000467114 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
PRPF40A-205ENST00000467114 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
PRPF40A-205ENST00000467114 TMEM92Q6UXU6 159 aa13.79□□□□□ -0.2
PRPF40A-205ENST00000467114 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-205ENST00000467114 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
PRPF40A-205ENST00000467114 MARVELD3Q96A59 401 aa13.75□□□□□ -0.21
PRPF40A-205ENST00000467114 HS6ST3Q8IZP7 471 aa13.73□□□□□ -0.21
PRPF40A-205ENST00000467114 DOK7Q18PE1 504 aa13.71□□□□□ -0.21
PRPF40A-205ENST00000467114 EMP3P54852 163 aa13.69□□□□□ -0.22
PRPF40A-205ENST00000467114 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
PRPF40A-205ENST00000467114 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms