RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
CCDC58-203ENST00000466854 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
CCDC58-203ENST00000466854 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
CCDC58-203ENST00000466854 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
CCDC58-203ENST00000466854 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
CCDC58-203ENST00000466854 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
CCDC58-203ENST00000466854 NUBP1P53384 320 aa11.87□□□□□ -0.51
CCDC58-203ENST00000466854 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-203ENST00000466854 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
CCDC58-203ENST00000466854 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
CCDC58-203ENST00000466854 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
CCDC58-203ENST00000466854 MAP3K13O43283 966 aa11.77□□□□□ -0.53
CCDC58-203ENST00000466854 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
CCDC58-203ENST00000466854 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-203ENST00000466854 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
CCDC58-203ENST00000466854 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
CCDC58-203ENST00000466854 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-203ENST00000466854 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
CCDC58-203ENST00000466854 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
CCDC58-203ENST00000466854 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
CCDC58-203ENST00000466854 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
CCDC58-203ENST00000466854 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
CCDC58-203ENST00000466854 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
CCDC58-203ENST00000466854 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
CCDC58-203ENST00000466854 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
CCDC58-203ENST00000466854 TIE1P35590 1138 aa11.63□□□□□ -0.55
CCDC58-203ENST00000466854 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
CCDC58-203ENST00000466854 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
CCDC58-203ENST00000466854 PYGBP11216 843 aa11.6□□□□□ -0.55
CCDC58-203ENST00000466854 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
CCDC58-203ENST00000466854 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
CCDC58-203ENST00000466854 C7P10643 843 aa11.58□□□□□ -0.56
CCDC58-203ENST00000466854 GSE1Q14687 1217 aa11.54□□□□□ -0.56
CCDC58-203ENST00000466854 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
CCDC58-203ENST00000466854 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
CCDC58-203ENST00000466854 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
CCDC58-203ENST00000466854 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
CCDC58-203ENST00000466854 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
CCDC58-203ENST00000466854 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
CCDC58-203ENST00000466854 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
CCDC58-203ENST00000466854 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
CCDC58-203ENST00000466854 IER5LQ5T953 404 aa11.43□□□□□ -0.58
CCDC58-203ENST00000466854 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-203ENST00000466854 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
CCDC58-203ENST00000466854 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-203ENST00000466854 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-203ENST00000466854 SEC24BO95487 1268 aa11.38□□□□□ -0.59
CCDC58-203ENST00000466854 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
CCDC58-203ENST00000466854 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
CCDC58-203ENST00000466854 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
CCDC58-203ENST00000466854 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
CCDC58-203ENST00000466854 PSEN1P49768 467 aa11.32□□□□□ -0.6
CCDC58-203ENST00000466854 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
CCDC58-203ENST00000466854 PLCG2P16885 1265 aa11.29□□□□□ -0.6
CCDC58-203ENST00000466854 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
CCDC58-203ENST00000466854 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
CCDC58-203ENST00000466854 OCEL1Q9H607 264 aa11.27□□□□□ -0.61
CCDC58-203ENST00000466854 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
CCDC58-203ENST00000466854 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-203ENST00000466854 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
CCDC58-203ENST00000466854 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
CCDC58-203ENST00000466854 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
CCDC58-203ENST00000466854 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-203ENST00000466854 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
CCDC58-203ENST00000466854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC58-203ENST00000466854 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
CCDC58-203ENST00000466854 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
CCDC58-203ENST00000466854 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
CCDC58-203ENST00000466854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
CCDC58-203ENST00000466854 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
CCDC58-203ENST00000466854 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
CCDC58-203ENST00000466854 VGFO15240 615 aaPredicted RBP11.08□□□□□ -0.64
CCDC58-203ENST00000466854 PKD2Q13563 968 aa11.08□□□□□ -0.64
CCDC58-203ENST00000466854 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
CCDC58-203ENST00000466854 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
CCDC58-203ENST00000466854 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
CCDC58-203ENST00000466854 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
CCDC58-203ENST00000466854 RGL2O15211 777 aa10.99□□□□□ -0.65
CCDC58-203ENST00000466854 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
CCDC58-203ENST00000466854 ST18O60284 1047 aa10.98□□□□□ -0.65
CCDC58-203ENST00000466854 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
CCDC58-203ENST00000466854 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
CCDC58-203ENST00000466854 SOX12O15370 315 aa10.96□□□□□ -0.65
CCDC58-203ENST00000466854 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
CCDC58-203ENST00000466854 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
CCDC58-203ENST00000466854 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
CCDC58-203ENST00000466854 STK24Q9Y6E0 443 aa10.93□□□□□ -0.66
CCDC58-203ENST00000466854 STK25O00506 426 aa10.92□□□□□ -0.66
CCDC58-203ENST00000466854 G3V3G9 751 aa10.91□□□□□ -0.66
CCDC58-203ENST00000466854 SNPHO15079 494 aa10.9□□□□□ -0.66
CCDC58-203ENST00000466854 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
CCDC58-203ENST00000466854 FBXO22Q8NEZ5 403 aa10.9□□□□□ -0.66
CCDC58-203ENST00000466854 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
CCDC58-203ENST00000466854 NLRP6P59044 892 aa10.86□□□□□ -0.67
CCDC58-203ENST00000466854 TMEM92Q6UXU6 159 aa10.85□□□□□ -0.67
CCDC58-203ENST00000466854 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-203ENST00000466854 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
CCDC58-203ENST00000466854 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
CCDC58-203ENST00000466854 EMP3P54852 163 aa10.73□□□□□ -0.69
CCDC58-203ENST00000466854 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms