RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
LSG1-206ENST00000466391 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
LSG1-206ENST00000466391 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
LSG1-206ENST00000466391 RGL2O15211 777 aa16.35■□□□□ 0.21
LSG1-206ENST00000466391 PYGBP11216 843 aa16.35■□□□□ 0.21
LSG1-206ENST00000466391 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
LSG1-206ENST00000466391 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
LSG1-206ENST00000466391 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
LSG1-206ENST00000466391 CHRM1P11229 460 aaPredicted RBP16.28■□□□□ 0.2
LSG1-206ENST00000466391 HAX1O00165 279 aa16.27■□□□□ 0.2
LSG1-206ENST00000466391 POTEHQ6S545 545 aa16.26■□□□□ 0.19
LSG1-206ENST00000466391 RNF25Q96BH1 459 aaPredicted RBP16.24■□□□□ 0.19
LSG1-206ENST00000466391 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
LSG1-206ENST00000466391 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
LSG1-206ENST00000466391 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
LSG1-206ENST00000466391 MAP3K13O43283 966 aa16.13■□□□□ 0.17
LSG1-206ENST00000466391 EVX2Q03828 476 aa16.13■□□□□ 0.17
LSG1-206ENST00000466391 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
LSG1-206ENST00000466391 PCDHB13Q9Y5F0 798 aa16.12■□□□□ 0.17
LSG1-206ENST00000466391 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
LSG1-206ENST00000466391 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
LSG1-206ENST00000466391 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
LSG1-206ENST00000466391 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
LSG1-206ENST00000466391 CHGAP10645 457 aaKnown RBP16.06■□□□□ 0.16
LSG1-206ENST00000466391 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
LSG1-206ENST00000466391 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
LSG1-206ENST00000466391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
LSG1-206ENST00000466391 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
LSG1-206ENST00000466391 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
LSG1-206ENST00000466391 STK25O00506 426 aa15.98■□□□□ 0.15
LSG1-206ENST00000466391 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
LSG1-206ENST00000466391 HS6ST3Q8IZP7 471 aa15.96■□□□□ 0.15
LSG1-206ENST00000466391 PSEN1P49768 467 aa15.94■□□□□ 0.14
LSG1-206ENST00000466391 BCL11BQ9C0K0 894 aaPredicted RBP15.92■□□□□ 0.14
LSG1-206ENST00000466391 STK24Q9Y6E0 443 aa15.92■□□□□ 0.14
LSG1-206ENST00000466391 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
LSG1-206ENST00000466391 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
LSG1-206ENST00000466391 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
LSG1-206ENST00000466391 CLCN6P51797 869 aa15.87■□□□□ 0.13
LSG1-206ENST00000466391 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
LSG1-206ENST00000466391 GABBR2O75899 941 aa15.82■□□□□ 0.12
LSG1-206ENST00000466391 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
LSG1-206ENST00000466391 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
LSG1-206ENST00000466391 TIE1P35590 1138 aa15.76■□□□□ 0.11
LSG1-206ENST00000466391 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
LSG1-206ENST00000466391 PLCB2Q00722 1185 aa15.75■□□□□ 0.11
LSG1-206ENST00000466391 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
LSG1-206ENST00000466391 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
LSG1-206ENST00000466391 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
LSG1-206ENST00000466391 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
LSG1-206ENST00000466391 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
LSG1-206ENST00000466391 TTLL13PA6NNM8 815 aa15.72■□□□□ 0.11
LSG1-206ENST00000466391 SPRYD3Q8NCJ5 442 aa15.7■□□□□ 0.1
LSG1-206ENST00000466391 EFCAB3Q8N7B9 438 aa15.69■□□□□ 0.1
LSG1-206ENST00000466391 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
LSG1-206ENST00000466391 DCBLD2Q96PD2 775 aa15.64■□□□□ 0.09
LSG1-206ENST00000466391 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
LSG1-206ENST00000466391 ATN1P54259 1190 aaPredicted RBP15.63■□□□□ 0.09
LSG1-206ENST00000466391 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
LSG1-206ENST00000466391 GTPBP6O43824 516 aaPredicted RBP15.61■□□□□ 0.09
LSG1-206ENST00000466391 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
LSG1-206ENST00000466391 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
LSG1-206ENST00000466391 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
LSG1-206ENST00000466391 MFRPQ9BY79 579 aa15.59■□□□□ 0.09
LSG1-206ENST00000466391 SOX12O15370 315 aa15.58■□□□□ 0.08
LSG1-206ENST00000466391 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
LSG1-206ENST00000466391 RYDENQ9NUL5 291 aaKnown RBP15.57■□□□□ 0.08
LSG1-206ENST00000466391 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
LSG1-206ENST00000466391 NLRP6P59044 892 aa15.54■□□□□ 0.08
LSG1-206ENST00000466391 FBXO22Q8NEZ5 403 aa15.51■□□□□ 0.07
LSG1-206ENST00000466391 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
LSG1-206ENST00000466391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
LSG1-206ENST00000466391 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
LSG1-206ENST00000466391 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
LSG1-206ENST00000466391 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
LSG1-206ENST00000466391 IER5LQ5T953 404 aa15.43■□□□□ 0.06
LSG1-206ENST00000466391 PPP1R37O75864 691 aa15.41■□□□□ 0.06
LSG1-206ENST00000466391 IRX5P78411 483 aaPredicted RBP15.39■□□□□ 0.05
LSG1-206ENST00000466391 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
LSG1-206ENST00000466391 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
LSG1-206ENST00000466391 OCEL1Q9H607 264 aa15.37■□□□□ 0.05
LSG1-206ENST00000466391 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
LSG1-206ENST00000466391 SEC24BO95487 1268 aa15.36■□□□□ 0.05
LSG1-206ENST00000466391 PLCG2P16885 1265 aa15.35■□□□□ 0.05
LSG1-206ENST00000466391 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
LSG1-206ENST00000466391 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
LSG1-206ENST00000466391 C7P10643 843 aa15.34■□□□□ 0.05
LSG1-206ENST00000466391 METRNQ9UJH8 293 aa15.34■□□□□ 0.05
LSG1-206ENST00000466391 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
LSG1-206ENST00000466391 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
LSG1-206ENST00000466391 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
LSG1-206ENST00000466391 CADPS2Q86UW7 1296 aa15.23■□□□□ 0.03
LSG1-206ENST00000466391 KDM2AQ9Y2K7 1162 aa15.22■□□□□ 0.03
LSG1-206ENST00000466391 G3V3G9 751 aa15.2■□□□□ 0.02
LSG1-206ENST00000466391 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
LSG1-206ENST00000466391 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
LSG1-206ENST00000466391 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
LSG1-206ENST00000466391 TMEM121BQ9BXQ6 578 aaPredicted RBP15.12■□□□□ 0.01
LSG1-206ENST00000466391 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
LSG1-206ENST00000466391 PDE4AP27815 886 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms