RNA–Protein interactions for RNA: ENST00000466308.1

CLSPN-204, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-204ENST00000466308 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
CLSPN-204ENST00000466308 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
CLSPN-204ENST00000466308 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
CLSPN-204ENST00000466308 NUBP1P53384 320 aa13.34□□□□□ -0.27
CLSPN-204ENST00000466308 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
CLSPN-204ENST00000466308 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
CLSPN-204ENST00000466308 STK25O00506 426 aa13.26□□□□□ -0.29
CLSPN-204ENST00000466308 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
CLSPN-204ENST00000466308 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
CLSPN-204ENST00000466308 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
CLSPN-204ENST00000466308 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
CLSPN-204ENST00000466308 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
CLSPN-204ENST00000466308 TIMELESSQ9UNS1 1208 aa13.18□□□□□ -0.3
CLSPN-204ENST00000466308 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
CLSPN-204ENST00000466308 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
CLSPN-204ENST00000466308 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
CLSPN-204ENST00000466308 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
CLSPN-204ENST00000466308 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
CLSPN-204ENST00000466308 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
CLSPN-204ENST00000466308 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
CLSPN-204ENST00000466308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
CLSPN-204ENST00000466308 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
CLSPN-204ENST00000466308 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
CLSPN-204ENST00000466308 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
CLSPN-204ENST00000466308 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
CLSPN-204ENST00000466308 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
CLSPN-204ENST00000466308 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
CLSPN-204ENST00000466308 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
CLSPN-204ENST00000466308 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
CLSPN-204ENST00000466308 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
CLSPN-204ENST00000466308 PYGBP11216 843 aa12.98□□□□□ -0.33
CLSPN-204ENST00000466308 WDR70Q9NW82 654 aa12.96□□□□□ -0.33
CLSPN-204ENST00000466308 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
CLSPN-204ENST00000466308 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
CLSPN-204ENST00000466308 ARXQ96QS3 562 aa12.91□□□□□ -0.34
CLSPN-204ENST00000466308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLSPN-204ENST00000466308 ZNF467Q7Z7K2 595 aaPredicted RBP12.87□□□□□ -0.35
CLSPN-204ENST00000466308 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
CLSPN-204ENST00000466308 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
CLSPN-204ENST00000466308 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
CLSPN-204ENST00000466308 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
CLSPN-204ENST00000466308 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
CLSPN-204ENST00000466308 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
CLSPN-204ENST00000466308 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
CLSPN-204ENST00000466308 PITPNM1O00562 1244 aa12.71□□□□□ -0.37
CLSPN-204ENST00000466308 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
CLSPN-204ENST00000466308 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
CLSPN-204ENST00000466308 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
CLSPN-204ENST00000466308 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
CLSPN-204ENST00000466308 PSEN1P49768 467 aa12.68□□□□□ -0.38
CLSPN-204ENST00000466308 E2F4Q16254 413 aa12.68□□□□□ -0.38
CLSPN-204ENST00000466308 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
CLSPN-204ENST00000466308 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
CLSPN-204ENST00000466308 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
CLSPN-204ENST00000466308 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
CLSPN-204ENST00000466308 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
CLSPN-204ENST00000466308 PPP1R37O75864 691 aa12.61□□□□□ -0.39
CLSPN-204ENST00000466308 NLRP6P59044 892 aa12.61□□□□□ -0.39
CLSPN-204ENST00000466308 SEMA3EO15041 775 aa12.6□□□□□ -0.39
CLSPN-204ENST00000466308 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
CLSPN-204ENST00000466308 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
CLSPN-204ENST00000466308 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
CLSPN-204ENST00000466308 SOX12O15370 315 aa12.58□□□□□ -0.4
CLSPN-204ENST00000466308 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
CLSPN-204ENST00000466308 SLC24A3Q9HC58 644 aa12.58□□□□□ -0.4
CLSPN-204ENST00000466308 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
CLSPN-204ENST00000466308 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
CLSPN-204ENST00000466308 ZMYND10O75800 440 aa12.52□□□□□ -0.41
CLSPN-204ENST00000466308 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
CLSPN-204ENST00000466308 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
CLSPN-204ENST00000466308 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
CLSPN-204ENST00000466308 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
CLSPN-204ENST00000466308 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
CLSPN-204ENST00000466308 PDE4AP27815 886 aa12.48□□□□□ -0.41
CLSPN-204ENST00000466308 MFSD10Q14728 455 aa12.47□□□□□ -0.41
CLSPN-204ENST00000466308 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
CLSPN-204ENST00000466308 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
CLSPN-204ENST00000466308 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
CLSPN-204ENST00000466308 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
CLSPN-204ENST00000466308 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
CLSPN-204ENST00000466308 MAP3K13O43283 966 aa12.41□□□□□ -0.42
CLSPN-204ENST00000466308 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
CLSPN-204ENST00000466308 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
CLSPN-204ENST00000466308 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
CLSPN-204ENST00000466308 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
CLSPN-204ENST00000466308 AK7Q96M32 723 aa12.37□□□□□ -0.43
CLSPN-204ENST00000466308 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
CLSPN-204ENST00000466308 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
CLSPN-204ENST00000466308 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLSPN-204ENST00000466308 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
CLSPN-204ENST00000466308 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
CLSPN-204ENST00000466308 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
CLSPN-204ENST00000466308 POTEHQ6S545 545 aa12.28□□□□□ -0.44
CLSPN-204ENST00000466308 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
CLSPN-204ENST00000466308 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
CLSPN-204ENST00000466308 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
CLSPN-204ENST00000466308 PPP1R15BQ5SWA1 713 aa12.22□□□□□ -0.45
CLSPN-204ENST00000466308 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
CLSPN-204ENST00000466308 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
CLSPN-204ENST00000466308 TRIM66O15016 1216 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms