RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
EXOSC3-204ENST00000465860 NUBP1P53384 320 aa11.38□□□□□ -0.59
EXOSC3-204ENST00000465860 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
EXOSC3-204ENST00000465860 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
EXOSC3-204ENST00000465860 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
EXOSC3-204ENST00000465860 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
EXOSC3-204ENST00000465860 MAP3K13O43283 966 aa11.27□□□□□ -0.61
EXOSC3-204ENST00000465860 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
EXOSC3-204ENST00000465860 KLHL34Q8N239 644 aa11.26□□□□□ -0.61
EXOSC3-204ENST00000465860 LHX8Q68G74 356 aa11.24□□□□□ -0.61
EXOSC3-204ENST00000465860 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
EXOSC3-204ENST00000465860 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
EXOSC3-204ENST00000465860 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
EXOSC3-204ENST00000465860 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
EXOSC3-204ENST00000465860 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
EXOSC3-204ENST00000465860 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
EXOSC3-204ENST00000465860 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
EXOSC3-204ENST00000465860 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
EXOSC3-204ENST00000465860 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
EXOSC3-204ENST00000465860 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
EXOSC3-204ENST00000465860 PYGBP11216 843 aa11.14□□□□□ -0.63
EXOSC3-204ENST00000465860 TIE1P35590 1138 aa11.13□□□□□ -0.63
EXOSC3-204ENST00000465860 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
EXOSC3-204ENST00000465860 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
EXOSC3-204ENST00000465860 GSE1Q14687 1217 aa11.1□□□□□ -0.63
EXOSC3-204ENST00000465860 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
EXOSC3-204ENST00000465860 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
EXOSC3-204ENST00000465860 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
EXOSC3-204ENST00000465860 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
EXOSC3-204ENST00000465860 C7P10643 843 aa11.07□□□□□ -0.64
EXOSC3-204ENST00000465860 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
EXOSC3-204ENST00000465860 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
EXOSC3-204ENST00000465860 CHRM1P11229 460 aaPredicted RBP11.01□□□□□ -0.65
EXOSC3-204ENST00000465860 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
EXOSC3-204ENST00000465860 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
EXOSC3-204ENST00000465860 POTEFA5A3E0 1075 aa11□□□□□ -0.65
EXOSC3-204ENST00000465860 OTUD5Q96G74 571 aa10.98□□□□□ -0.65
EXOSC3-204ENST00000465860 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
EXOSC3-204ENST00000465860 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-204ENST00000465860 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
EXOSC3-204ENST00000465860 IER5LQ5T953 404 aa10.93□□□□□ -0.66
EXOSC3-204ENST00000465860 SEC24BO95487 1268 aa10.91□□□□□ -0.66
EXOSC3-204ENST00000465860 PSEN1P49768 467 aa10.87□□□□□ -0.67
EXOSC3-204ENST00000465860 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
EXOSC3-204ENST00000465860 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
EXOSC3-204ENST00000465860 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-204ENST00000465860 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
EXOSC3-204ENST00000465860 PLCG2P16885 1265 aa10.82□□□□□ -0.68
EXOSC3-204ENST00000465860 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
EXOSC3-204ENST00000465860 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
EXOSC3-204ENST00000465860 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
EXOSC3-204ENST00000465860 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
EXOSC3-204ENST00000465860 RNF25Q96BH1 459 aaPredicted RBP10.76□□□□□ -0.69
EXOSC3-204ENST00000465860 PDCD7Q8N8D1 485 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-204ENST00000465860 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
EXOSC3-204ENST00000465860 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
EXOSC3-204ENST00000465860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.71□□□□□ -0.69
EXOSC3-204ENST00000465860 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
EXOSC3-204ENST00000465860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-204ENST00000465860 PKD2Q13563 968 aa10.66□□□□□ -0.7
EXOSC3-204ENST00000465860 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-204ENST00000465860 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.7
EXOSC3-204ENST00000465860 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
EXOSC3-204ENST00000465860 SLAIN1Q8ND83 568 aa10.65□□□□□ -0.7
EXOSC3-204ENST00000465860 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
EXOSC3-204ENST00000465860 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
EXOSC3-204ENST00000465860 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-204ENST00000465860 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-204ENST00000465860 FAM163AQ96GL9 167 aaPredicted RBP10.61□□□□□ -0.71
EXOSC3-204ENST00000465860 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
EXOSC3-204ENST00000465860 RGL2O15211 777 aa10.58□□□□□ -0.72
EXOSC3-204ENST00000465860 POTEMA6NI47 508 aa10.57□□□□□ -0.72
EXOSC3-204ENST00000465860 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
EXOSC3-204ENST00000465860 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
EXOSC3-204ENST00000465860 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
EXOSC3-204ENST00000465860 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
EXOSC3-204ENST00000465860 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
EXOSC3-204ENST00000465860 SOX12O15370 315 aa10.53□□□□□ -0.72
EXOSC3-204ENST00000465860 PHF8Q9UPP1 1060 aa10.52□□□□□ -0.73
EXOSC3-204ENST00000465860 STK24Q9Y6E0 443 aa10.52□□□□□ -0.73
EXOSC3-204ENST00000465860 STK25O00506 426 aa10.51□□□□□ -0.73
EXOSC3-204ENST00000465860 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
EXOSC3-204ENST00000465860 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
EXOSC3-204ENST00000465860 G3V3G9 751 aa10.5□□□□□ -0.73
EXOSC3-204ENST00000465860 ST18O60284 1047 aa10.48□□□□□ -0.73
EXOSC3-204ENST00000465860 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
EXOSC3-204ENST00000465860 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
EXOSC3-204ENST00000465860 SNPHO15079 494 aa10.44□□□□□ -0.74
EXOSC3-204ENST00000465860 NLRP6P59044 892 aa10.44□□□□□ -0.74
EXOSC3-204ENST00000465860 MICALL2Q8IY33 904 aa10.44□□□□□ -0.74
EXOSC3-204ENST00000465860 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
EXOSC3-204ENST00000465860 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
EXOSC3-204ENST00000465860 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
EXOSC3-204ENST00000465860 ABCC9O60706 1549 aa10.34□□□□□ -0.75
EXOSC3-204ENST00000465860 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-204ENST00000465860 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
EXOSC3-204ENST00000465860 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
EXOSC3-204ENST00000465860 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
EXOSC3-204ENST00000465860 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-204ENST00000465860 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms