RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
UBR3-207ENST00000465630 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
UBR3-207ENST00000465630 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
UBR3-207ENST00000465630 NUBP1P53384 320 aa11.74□□□□□ -0.53
UBR3-207ENST00000465630 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
UBR3-207ENST00000465630 ASTLQ6HA08 431 aaPredicted RBP11.7□□□□□ -0.54
UBR3-207ENST00000465630 MAP3K13O43283 966 aa11.69□□□□□ -0.54
UBR3-207ENST00000465630 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
UBR3-207ENST00000465630 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
UBR3-207ENST00000465630 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
UBR3-207ENST00000465630 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
UBR3-207ENST00000465630 ATN1P54259 1190 aaPredicted RBP11.62□□□□□ -0.55
UBR3-207ENST00000465630 VASPP50552 380 aaPredicted RBP11.61□□□□□ -0.55
UBR3-207ENST00000465630 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
UBR3-207ENST00000465630 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
UBR3-207ENST00000465630 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
UBR3-207ENST00000465630 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
UBR3-207ENST00000465630 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
UBR3-207ENST00000465630 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
UBR3-207ENST00000465630 C7P10643 843 aa11.56□□□□□ -0.56
UBR3-207ENST00000465630 TIE1P35590 1138 aa11.56□□□□□ -0.56
UBR3-207ENST00000465630 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
UBR3-207ENST00000465630 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
UBR3-207ENST00000465630 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
UBR3-207ENST00000465630 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
UBR3-207ENST00000465630 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
UBR3-207ENST00000465630 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
UBR3-207ENST00000465630 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
UBR3-207ENST00000465630 PYGBP11216 843 aa11.48□□□□□ -0.57
UBR3-207ENST00000465630 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
UBR3-207ENST00000465630 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
UBR3-207ENST00000465630 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
UBR3-207ENST00000465630 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
UBR3-207ENST00000465630 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
UBR3-207ENST00000465630 GSE1Q14687 1217 aa11.38□□□□□ -0.59
UBR3-207ENST00000465630 IER5LQ5T953 404 aa11.36□□□□□ -0.59
UBR3-207ENST00000465630 SEC24BO95487 1268 aa11.35□□□□□ -0.59
UBR3-207ENST00000465630 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
UBR3-207ENST00000465630 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
UBR3-207ENST00000465630 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
UBR3-207ENST00000465630 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
UBR3-207ENST00000465630 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
UBR3-207ENST00000465630 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
UBR3-207ENST00000465630 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
UBR3-207ENST00000465630 PLCG2P16885 1265 aa11.26□□□□□ -0.61
UBR3-207ENST00000465630 PSEN1P49768 467 aa11.21□□□□□ -0.61
UBR3-207ENST00000465630 LCE2DQ5TA82 110 aaPredicted RBP11.2□□□□□ -0.62
UBR3-207ENST00000465630 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
UBR3-207ENST00000465630 POTEMA6NI47 508 aa11.18□□□□□ -0.62
UBR3-207ENST00000465630 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
UBR3-207ENST00000465630 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
UBR3-207ENST00000465630 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
UBR3-207ENST00000465630 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
UBR3-207ENST00000465630 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
UBR3-207ENST00000465630 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
UBR3-207ENST00000465630 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
UBR3-207ENST00000465630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■□□□□ 10.9
UBR3-207ENST00000465630 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
UBR3-207ENST00000465630 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
UBR3-207ENST00000465630 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
UBR3-207ENST00000465630 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
UBR3-207ENST00000465630 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
UBR3-207ENST00000465630 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
UBR3-207ENST00000465630 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
UBR3-207ENST00000465630 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
UBR3-207ENST00000465630 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
UBR3-207ENST00000465630 ST18O60284 1047 aa10.98□□□□□ -0.65
UBR3-207ENST00000465630 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
UBR3-207ENST00000465630 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
UBR3-207ENST00000465630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
UBR3-207ENST00000465630 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
UBR3-207ENST00000465630 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
UBR3-207ENST00000465630 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
UBR3-207ENST00000465630 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
UBR3-207ENST00000465630 SNPHO15079 494 aa10.87□□□□□ -0.67
UBR3-207ENST00000465630 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
UBR3-207ENST00000465630 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
UBR3-207ENST00000465630 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
UBR3-207ENST00000465630 PKD2Q13563 968 aa10.84□□□□□ -0.67
UBR3-207ENST00000465630 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
UBR3-207ENST00000465630 G3V3G9 751 aa10.83□□□□□ -0.68
UBR3-207ENST00000465630 MARVELD3Q96A59 401 aa10.83□□□□□ -0.68
UBR3-207ENST00000465630 SOX12O15370 315 aa10.82□□□□□ -0.68
UBR3-207ENST00000465630 ECM2O94769 699 aaPredicted RBP10.82□□□□□ -0.68
UBR3-207ENST00000465630 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
UBR3-207ENST00000465630 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
UBR3-207ENST00000465630 RGL2O15211 777 aa10.78□□□□□ -0.68
UBR3-207ENST00000465630 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.69
UBR3-207ENST00000465630 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
UBR3-207ENST00000465630 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
UBR3-207ENST00000465630 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
UBR3-207ENST00000465630 STK25O00506 426 aa10.74□□□□□ -0.69
UBR3-207ENST00000465630 EMP3P54852 163 aa10.73□□□□□ -0.69
UBR3-207ENST00000465630 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
UBR3-207ENST00000465630 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
UBR3-207ENST00000465630 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
UBR3-207ENST00000465630 NLRP6P59044 892 aa10.71□□□□□ -0.69
UBR3-207ENST00000465630 POTEBQ6S5H4 581 aa10.71□□□□□ -0.69
UBR3-207ENST00000465630 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
UBR3-207ENST00000465630 HS3ST6Q96QI5 342 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms