RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
XRN1-205ENST00000465507 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
XRN1-205ENST00000465507 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
XRN1-205ENST00000465507 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
XRN1-205ENST00000465507 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
XRN1-205ENST00000465507 IFNLR1Q8IU57 520 aaPredicted RBP9.99□□□□□ -0.81
XRN1-205ENST00000465507 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
XRN1-205ENST00000465507 KIF12Q96FN5 646 aa9.99□□□□□ -0.81
XRN1-205ENST00000465507 NUBP1P53384 320 aa9.96□□□□□ -0.82
XRN1-205ENST00000465507 ASTLQ6HA08 431 aaPredicted RBP9.96□□□□□ -0.82
XRN1-205ENST00000465507 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
XRN1-205ENST00000465507 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
XRN1-205ENST00000465507 MAP3K13O43283 966 aa9.94□□□□□ -0.82
XRN1-205ENST00000465507 TRPC6Q9Y210 931 aa9.94□□□□□ -0.82
XRN1-205ENST00000465507 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
XRN1-205ENST00000465507 METRNQ9UJH8 293 aa9.9□□□□□ -0.82
XRN1-205ENST00000465507 ATN1P54259 1190 aaPredicted RBP9.89□□□□□ -0.83
XRN1-205ENST00000465507 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
XRN1-205ENST00000465507 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
XRN1-205ENST00000465507 SPOCK2Q92563 424 aa9.87□□□□□ -0.83
XRN1-205ENST00000465507 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
XRN1-205ENST00000465507 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
XRN1-205ENST00000465507 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
XRN1-205ENST00000465507 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
XRN1-205ENST00000465507 C7P10643 843 aa9.84□□□□□ -0.83
XRN1-205ENST00000465507 TIE1P35590 1138 aa9.83□□□□□ -0.84
XRN1-205ENST00000465507 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
XRN1-205ENST00000465507 TTLL13PA6NNM8 815 aa9.81□□□□□ -0.84
XRN1-205ENST00000465507 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
XRN1-205ENST00000465507 SGIP1Q9BQI5 828 aa9.8□□□□□ -0.84
XRN1-205ENST00000465507 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
XRN1-205ENST00000465507 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
XRN1-205ENST00000465507 PYGBP11216 843 aa9.77□□□□□ -0.85
XRN1-205ENST00000465507 TRIM35Q9UPQ4 493 aa9.75□□□□□ -0.85
XRN1-205ENST00000465507 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
XRN1-205ENST00000465507 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
XRN1-205ENST00000465507 TMEM106CQ9BVX2 250 aa9.72□□□□□ -0.85
XRN1-205ENST00000465507 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
XRN1-205ENST00000465507 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
XRN1-205ENST00000465507 SEC24BO95487 1268 aa9.68□□□□□ -0.86
XRN1-205ENST00000465507 GSE1Q14687 1217 aa9.68□□□□□ -0.86
XRN1-205ENST00000465507 MAMSTRQ6ZN01 415 aa9.68□□□□□ -0.86
XRN1-205ENST00000465507 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
XRN1-205ENST00000465507 IER5LQ5T953 404 aa9.67□□□□□ -0.86
XRN1-205ENST00000465507 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
XRN1-205ENST00000465507 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
XRN1-205ENST00000465507 PKD2Q13563 968 aa9.63□□□□□ -0.87
XRN1-205ENST00000465507 PLCG2P16885 1265 aa9.59□□□□□ -0.87
XRN1-205ENST00000465507 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
XRN1-205ENST00000465507 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
XRN1-205ENST00000465507 CHRM1P11229 460 aaPredicted RBP9.58□□□□□ -0.88
XRN1-205ENST00000465507 POTEMA6NI47 508 aa9.55□□□□□ -0.88
XRN1-205ENST00000465507 RGL2O15211 777 aa9.54□□□□□ -0.88
XRN1-205ENST00000465507 LCE2DQ5TA82 110 aaPredicted RBP9.54□□□□□ -0.88
XRN1-205ENST00000465507 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
XRN1-205ENST00000465507 PSEN1P49768 467 aa9.53□□□□□ -0.88
XRN1-205ENST00000465507 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
XRN1-205ENST00000465507 FAM163AQ96GL9 167 aaPredicted RBP9.51□□□□□ -0.89
XRN1-205ENST00000465507 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
XRN1-205ENST00000465507 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
XRN1-205ENST00000465507 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
XRN1-205ENST00000465507 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
XRN1-205ENST00000465507 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
XRN1-205ENST00000465507 MKRN3Q13064 507 aaKnown RBP9.47□□□□□ -0.89
XRN1-205ENST00000465507 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
XRN1-205ENST00000465507 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
XRN1-205ENST00000465507 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
XRN1-205ENST00000465507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.92e-9■■□□□ 13.9
XRN1-205ENST00000465507 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
XRN1-205ENST00000465507 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
XRN1-205ENST00000465507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.39□□□□□ -0.91
XRN1-205ENST00000465507 ZFP91Q96JP5 570 aaPredicted RBP9.39□□□□□ -0.91
XRN1-205ENST00000465507 STK25O00506 426 aa9.38□□□□□ -0.91
XRN1-205ENST00000465507 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
XRN1-205ENST00000465507 VGFO15240 615 aaPredicted RBP9.37□□□□□ -0.91
XRN1-205ENST00000465507 ILDR1Q86SU0 546 aaPredicted RBP9.37□□□□□ -0.91
XRN1-205ENST00000465507 ST18O60284 1047 aa9.36□□□□□ -0.91
XRN1-205ENST00000465507 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
XRN1-205ENST00000465507 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
XRN1-205ENST00000465507 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
XRN1-205ENST00000465507 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
XRN1-205ENST00000465507 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
XRN1-205ENST00000465507 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
XRN1-205ENST00000465507 PCDH10Q9P2E7 1040 aa9.32□□□□□ -0.92
XRN1-205ENST00000465507 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
XRN1-205ENST00000465507 SNPHO15079 494 aa9.27□□□□□ -0.93
XRN1-205ENST00000465507 G3V3G9 751 aa9.26□□□□□ -0.93
XRN1-205ENST00000465507 CDAN1Q8IWY9 1227 aa9.26□□□□□ -0.93
XRN1-205ENST00000465507 HS6ST3Q8IZP7 471 aa9.24□□□□□ -0.93
XRN1-205ENST00000465507 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
XRN1-205ENST00000465507 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
XRN1-205ENST00000465507 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
XRN1-205ENST00000465507 MS4A4AQ96JQ5 239 aa9.21□□□□□ -0.94
XRN1-205ENST00000465507 PHF8Q9UPP1 1060 aa9.21□□□□□ -0.94
XRN1-205ENST00000465507 SOX12O15370 315 aa9.18□□□□□ -0.94
XRN1-205ENST00000465507 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
XRN1-205ENST00000465507 MICALL2Q8IY33 904 aa9.18□□□□□ -0.94
XRN1-205ENST00000465507 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
XRN1-205ENST00000465507 HOXB3P14651 431 aaPredicted RBP9.16□□□□□ -0.94
XRN1-205ENST00000465507 EMP3P54852 163 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms