RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
VPS8-217ENST00000465213 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
VPS8-217ENST00000465213 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
VPS8-217ENST00000465213 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
VPS8-217ENST00000465213 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
VPS8-217ENST00000465213 ATMINO43313 823 aaPredicted RBP13.69□□□□□ -0.22
VPS8-217ENST00000465213 NUBP1P53384 320 aa13.65□□□□□ -0.22
VPS8-217ENST00000465213 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
VPS8-217ENST00000465213 MAP3K13O43283 966 aa13.62□□□□□ -0.23
VPS8-217ENST00000465213 SLC39A7Q92504 469 aa13.62□□□□□ -0.23
VPS8-217ENST00000465213 C7P10643 843 aa13.61□□□□□ -0.23
VPS8-217ENST00000465213 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
VPS8-217ENST00000465213 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
VPS8-217ENST00000465213 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
VPS8-217ENST00000465213 TIE1P35590 1138 aa13.57□□□□□ -0.24
VPS8-217ENST00000465213 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
VPS8-217ENST00000465213 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
VPS8-217ENST00000465213 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
VPS8-217ENST00000465213 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
VPS8-217ENST00000465213 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
VPS8-217ENST00000465213 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
VPS8-217ENST00000465213 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
VPS8-217ENST00000465213 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
VPS8-217ENST00000465213 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
VPS8-217ENST00000465213 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
VPS8-217ENST00000465213 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
VPS8-217ENST00000465213 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
VPS8-217ENST00000465213 IER5LQ5T953 404 aa13.38□□□□□ -0.27
VPS8-217ENST00000465213 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
VPS8-217ENST00000465213 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
VPS8-217ENST00000465213 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
VPS8-217ENST00000465213 SCUBE2Q9NQ36 999 aa13.32□□□□□ -0.28
VPS8-217ENST00000465213 PYGBP11216 843 aa13.31□□□□□ -0.28
VPS8-217ENST00000465213 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
VPS8-217ENST00000465213 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
VPS8-217ENST00000465213 SEC24BO95487 1268 aa13.29□□□□□ -0.28
VPS8-217ENST00000465213 GSE1Q14687 1217 aa13.28□□□□□ -0.28
VPS8-217ENST00000465213 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
VPS8-217ENST00000465213 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
VPS8-217ENST00000465213 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
VPS8-217ENST00000465213 POTEMA6NI47 508 aa13.18□□□□□ -0.3
VPS8-217ENST00000465213 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
VPS8-217ENST00000465213 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
VPS8-217ENST00000465213 PLCG2P16885 1265 aa13.16□□□□□ -0.3
VPS8-217ENST00000465213 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
VPS8-217ENST00000465213 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
VPS8-217ENST00000465213 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
VPS8-217ENST00000465213 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
VPS8-217ENST00000465213 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
VPS8-217ENST00000465213 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
VPS8-217ENST00000465213 PSEN1P49768 467 aa13.03□□□□□ -0.32
VPS8-217ENST00000465213 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
VPS8-217ENST00000465213 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
VPS8-217ENST00000465213 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
VPS8-217ENST00000465213 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
VPS8-217ENST00000465213 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
VPS8-217ENST00000465213 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
VPS8-217ENST00000465213 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
VPS8-217ENST00000465213 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
VPS8-217ENST00000465213 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
VPS8-217ENST00000465213 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
VPS8-217ENST00000465213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■□□□ 14.5
VPS8-217ENST00000465213 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
VPS8-217ENST00000465213 ST18O60284 1047 aa12.88□□□□□ -0.35
VPS8-217ENST00000465213 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
VPS8-217ENST00000465213 SNPHO15079 494 aa12.84□□□□□ -0.35
VPS8-217ENST00000465213 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
VPS8-217ENST00000465213 TMEM121BQ9BXQ6 578 aaPredicted RBP12.82□□□□□ -0.36
VPS8-217ENST00000465213 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
VPS8-217ENST00000465213 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
VPS8-217ENST00000465213 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
VPS8-217ENST00000465213 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
VPS8-217ENST00000465213 BOLA1Q9Y3E2 137 aa12.73□□□□□ -0.37
VPS8-217ENST00000465213 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
VPS8-217ENST00000465213 G3V3G9 751 aa12.68□□□□□ -0.38
VPS8-217ENST00000465213 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
VPS8-217ENST00000465213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
VPS8-217ENST00000465213 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
VPS8-217ENST00000465213 SOX12O15370 315 aa12.64□□□□□ -0.39
VPS8-217ENST00000465213 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
VPS8-217ENST00000465213 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
VPS8-217ENST00000465213 EMP3P54852 163 aa12.57□□□□□ -0.4
VPS8-217ENST00000465213 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
VPS8-217ENST00000465213 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
VPS8-217ENST00000465213 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
VPS8-217ENST00000465213 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
VPS8-217ENST00000465213 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
VPS8-217ENST00000465213 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
VPS8-217ENST00000465213 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
VPS8-217ENST00000465213 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
VPS8-217ENST00000465213 HOXB1P14653 301 aaPredicted RBP12.49□□□□□ -0.41
VPS8-217ENST00000465213 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
VPS8-217ENST00000465213 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
VPS8-217ENST00000465213 NLRP6P59044 892 aa12.48□□□□□ -0.41
VPS8-217ENST00000465213 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
VPS8-217ENST00000465213 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
VPS8-217ENST00000465213 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
VPS8-217ENST00000465213 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
VPS8-217ENST00000465213 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
VPS8-217ENST00000465213 PKD2Q13563 968 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms