RNA–Protein interactions for RNA: ENST00000465051.1

CEACAM1-209, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 2

Gene CEACAM1, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-209ENST00000465051 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
CEACAM1-209ENST00000465051 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
CEACAM1-209ENST00000465051 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
CEACAM1-209ENST00000465051 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
CEACAM1-209ENST00000465051 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
CEACAM1-209ENST00000465051 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
CEACAM1-209ENST00000465051 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
CEACAM1-209ENST00000465051 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
CEACAM1-209ENST00000465051 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
CEACAM1-209ENST00000465051 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CEACAM1-209ENST00000465051 C7P10643 843 aa13.3□□□□□ -0.28
CEACAM1-209ENST00000465051 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
CEACAM1-209ENST00000465051 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
CEACAM1-209ENST00000465051 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CEACAM1-209ENST00000465051 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
CEACAM1-209ENST00000465051 NUBP1P53384 320 aa13.21□□□□□ -0.29
CEACAM1-209ENST00000465051 TIE1P35590 1138 aa13.19□□□□□ -0.3
CEACAM1-209ENST00000465051 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
CEACAM1-209ENST00000465051 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
CEACAM1-209ENST00000465051 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
CEACAM1-209ENST00000465051 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
CEACAM1-209ENST00000465051 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
CEACAM1-209ENST00000465051 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
CEACAM1-209ENST00000465051 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
CEACAM1-209ENST00000465051 SEC24BO95487 1268 aa13.09□□□□□ -0.31
CEACAM1-209ENST00000465051 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
CEACAM1-209ENST00000465051 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
CEACAM1-209ENST00000465051 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
CEACAM1-209ENST00000465051 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
CEACAM1-209ENST00000465051 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
CEACAM1-209ENST00000465051 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
CEACAM1-209ENST00000465051 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
CEACAM1-209ENST00000465051 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
CEACAM1-209ENST00000465051 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-209ENST00000465051 PYGBP11216 843 aa13.01□□□□□ -0.33
CEACAM1-209ENST00000465051 POTEMA6NI47 508 aa13□□□□□ -0.33
CEACAM1-209ENST00000465051 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
CEACAM1-209ENST00000465051 IER5LQ5T953 404 aa12.99□□□□□ -0.33
CEACAM1-209ENST00000465051 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
CEACAM1-209ENST00000465051 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
CEACAM1-209ENST00000465051 PLCG2P16885 1265 aa12.91□□□□□ -0.34
CEACAM1-209ENST00000465051 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
CEACAM1-209ENST00000465051 GSE1Q14687 1217 aa12.89□□□□□ -0.35
CEACAM1-209ENST00000465051 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
CEACAM1-209ENST00000465051 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
CEACAM1-209ENST00000465051 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
CEACAM1-209ENST00000465051 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-209ENST00000465051 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
CEACAM1-209ENST00000465051 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
CEACAM1-209ENST00000465051 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
CEACAM1-209ENST00000465051 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
CEACAM1-209ENST00000465051 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
CEACAM1-209ENST00000465051 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
CEACAM1-209ENST00000465051 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
CEACAM1-209ENST00000465051 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-209ENST00000465051 PSEN1P49768 467 aa12.7□□□□□ -0.38
CEACAM1-209ENST00000465051 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
CEACAM1-209ENST00000465051 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-209ENST00000465051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
CEACAM1-209ENST00000465051 ST18O60284 1047 aa12.63□□□□□ -0.39
CEACAM1-209ENST00000465051 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CEACAM1-209ENST00000465051 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
CEACAM1-209ENST00000465051 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
CEACAM1-209ENST00000465051 SNPHO15079 494 aa12.58□□□□□ -0.4
CEACAM1-209ENST00000465051 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
CEACAM1-209ENST00000465051 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
CEACAM1-209ENST00000465051 G3V3G9 751 aa12.5□□□□□ -0.41
CEACAM1-209ENST00000465051 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CEACAM1-209ENST00000465051 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
CEACAM1-209ENST00000465051 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
CEACAM1-209ENST00000465051 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
CEACAM1-209ENST00000465051 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
CEACAM1-209ENST00000465051 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
CEACAM1-209ENST00000465051 EMP3P54852 163 aa12.38□□□□□ -0.43
CEACAM1-209ENST00000465051 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
CEACAM1-209ENST00000465051 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
CEACAM1-209ENST00000465051 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-209ENST00000465051 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-209ENST00000465051 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-209ENST00000465051 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
CEACAM1-209ENST00000465051 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
CEACAM1-209ENST00000465051 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
CEACAM1-209ENST00000465051 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
CEACAM1-209ENST00000465051 SOX12O15370 315 aa12.24□□□□□ -0.45
CEACAM1-209ENST00000465051 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
CEACAM1-209ENST00000465051 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
CEACAM1-209ENST00000465051 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
CEACAM1-209ENST00000465051 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
CEACAM1-209ENST00000465051 MMRN1Q13201 1228 aa12.21□□□□□ -0.45
CEACAM1-209ENST00000465051 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
CEACAM1-209ENST00000465051 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
CEACAM1-209ENST00000465051 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
CEACAM1-209ENST00000465051 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
CEACAM1-209ENST00000465051 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
CEACAM1-209ENST00000465051 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
CEACAM1-209ENST00000465051 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
CEACAM1-209ENST00000465051 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
CEACAM1-209ENST00000465051 ERBB3P21860 1342 aa12.14□□□□□ -0.47
CEACAM1-209ENST00000465051 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
CEACAM1-209ENST00000465051 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms