RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 RASEFQ8IZ41 740 aa10.22□□□□□ -0.77
SCN3A-206ENST00000465043 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
SCN3A-206ENST00000465043 NUBP1P53384 320 aa10.2□□□□□ -0.78
SCN3A-206ENST00000465043 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
SCN3A-206ENST00000465043 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
SCN3A-206ENST00000465043 PLSCR2Q9NRY7 297 aa10.16□□□□□ -0.78
SCN3A-206ENST00000465043 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
SCN3A-206ENST00000465043 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
SCN3A-206ENST00000465043 SGIP1Q9BQI5 828 aa10.14□□□□□ -0.79
SCN3A-206ENST00000465043 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
SCN3A-206ENST00000465043 GSE1Q14687 1217 aa10.1□□□□□ -0.79
SCN3A-206ENST00000465043 MAP3K13O43283 966 aa10.09□□□□□ -0.79
SCN3A-206ENST00000465043 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
SCN3A-206ENST00000465043 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
SCN3A-206ENST00000465043 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
SCN3A-206ENST00000465043 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
SCN3A-206ENST00000465043 TIE1P35590 1138 aa10.04□□□□□ -0.8
SCN3A-206ENST00000465043 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
SCN3A-206ENST00000465043 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
SCN3A-206ENST00000465043 SLC39A7Q92504 469 aa10.01□□□□□ -0.81
SCN3A-206ENST00000465043 C7P10643 843 aa10□□□□□ -0.81
SCN3A-206ENST00000465043 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
SCN3A-206ENST00000465043 PYGBP11216 843 aa9.97□□□□□ -0.81
SCN3A-206ENST00000465043 IFNL1Q8IU54 200 aa9.97□□□□□ -0.81
SCN3A-206ENST00000465043 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
SCN3A-206ENST00000465043 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
SCN3A-206ENST00000465043 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
SCN3A-206ENST00000465043 ATN1P54259 1190 aaPredicted RBP9.94□□□□□ -0.82
SCN3A-206ENST00000465043 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
SCN3A-206ENST00000465043 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
SCN3A-206ENST00000465043 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
SCN3A-206ENST00000465043 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
SCN3A-206ENST00000465043 TRPC6Q9Y210 931 aa9.92□□□□□ -0.82
SCN3A-206ENST00000465043 IER5LQ5T953 404 aa9.91□□□□□ -0.82
SCN3A-206ENST00000465043 TMEM106CQ9BVX2 250 aa9.9□□□□□ -0.82
SCN3A-206ENST00000465043 PCDHB8Q9UN66 801 aa9.87□□□□□ -0.83
SCN3A-206ENST00000465043 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
SCN3A-206ENST00000465043 MAMSTRQ6ZN01 415 aa9.86□□□□□ -0.83
SCN3A-206ENST00000465043 SEC24BO95487 1268 aa9.85□□□□□ -0.83
SCN3A-206ENST00000465043 OTUD5Q96G74 571 aa9.84□□□□□ -0.83
SCN3A-206ENST00000465043 POTEMA6NI47 508 aa9.81□□□□□ -0.84
SCN3A-206ENST00000465043 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
SCN3A-206ENST00000465043 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
SCN3A-206ENST00000465043 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
SCN3A-206ENST00000465043 PSEN1P49768 467 aa9.78□□□□□ -0.84
SCN3A-206ENST00000465043 PLCG2P16885 1265 aa9.77□□□□□ -0.85
SCN3A-206ENST00000465043 POTEGQ6S5H5 508 aa9.77□□□□□ -0.85
SCN3A-206ENST00000465043 SCUBE2Q9NQ36 999 aa9.77□□□□□ -0.85
SCN3A-206ENST00000465043 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
SCN3A-206ENST00000465043 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
SCN3A-206ENST00000465043 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
SCN3A-206ENST00000465043 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
SCN3A-206ENST00000465043 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
SCN3A-206ENST00000465043 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
SCN3A-206ENST00000465043 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
SCN3A-206ENST00000465043 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
SCN3A-206ENST00000465043 POTEJP0CG39 1038 aa9.69□□□□□ -0.86
SCN3A-206ENST00000465043 VGFO15240 615 aaPredicted RBP9.66□□□□□ -0.86
SCN3A-206ENST00000465043 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
SCN3A-206ENST00000465043 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
SCN3A-206ENST00000465043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCN3A-206ENST00000465043 ECM2O94769 699 aaPredicted RBP9.61□□□□□ -0.87
SCN3A-206ENST00000465043 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
SCN3A-206ENST00000465043 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
SCN3A-206ENST00000465043 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
SCN3A-206ENST00000465043 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
SCN3A-206ENST00000465043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
SCN3A-206ENST00000465043 PKD2Q13563 968 aa9.57□□□□□ -0.88
SCN3A-206ENST00000465043 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
SCN3A-206ENST00000465043 G3V3G9 751 aa9.56□□□□□ -0.88
SCN3A-206ENST00000465043 SOX12O15370 315 aa9.56□□□□□ -0.88
SCN3A-206ENST00000465043 SLAIN1Q8ND83 568 aa9.56□□□□□ -0.88
SCN3A-206ENST00000465043 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
SCN3A-206ENST00000465043 EFCAB3Q8N7B9 438 aa9.54□□□□□ -0.88
SCN3A-206ENST00000465043 SNPHO15079 494 aa9.51□□□□□ -0.89
SCN3A-206ENST00000465043 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
SCN3A-206ENST00000465043 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
SCN3A-206ENST00000465043 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
SCN3A-206ENST00000465043 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
SCN3A-206ENST00000465043 STK25O00506 426 aa9.49□□□□□ -0.89
SCN3A-206ENST00000465043 RGL2O15211 777 aa9.48□□□□□ -0.89
SCN3A-206ENST00000465043 STK24Q9Y6E0 443 aa9.48□□□□□ -0.89
SCN3A-206ENST00000465043 NLRP6P59044 892 aa9.47□□□□□ -0.89
SCN3A-206ENST00000465043 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
SCN3A-206ENST00000465043 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
SCN3A-206ENST00000465043 PHF8Q9UPP1 1060 aa9.42□□□□□ -0.9
SCN3A-206ENST00000465043 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
SCN3A-206ENST00000465043 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
SCN3A-206ENST00000465043 HS6ST3Q8IZP7 471 aa9.37□□□□□ -0.91
SCN3A-206ENST00000465043 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
SCN3A-206ENST00000465043 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
SCN3A-206ENST00000465043 ST18O60284 1047 aa9.35□□□□□ -0.91
SCN3A-206ENST00000465043 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
SCN3A-206ENST00000465043 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
SCN3A-206ENST00000465043 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
SCN3A-206ENST00000465043 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
SCN3A-206ENST00000465043 RIMBP2O15034 1052 aa9.29□□□□□ -0.92
SCN3A-206ENST00000465043 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
SCN3A-206ENST00000465043 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
SCN3A-206ENST00000465043 HOXB3P14651 431 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms