RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
UBR4-209ENST00000465036 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
UBR4-209ENST00000465036 MS4A3Q96HJ5 214 aa15.66■□□□□ 0.1
UBR4-209ENST00000465036 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
UBR4-209ENST00000465036 NUBP1P53384 320 aa15.61■□□□□ 0.09
UBR4-209ENST00000465036 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
UBR4-209ENST00000465036 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
UBR4-209ENST00000465036 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
UBR4-209ENST00000465036 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
UBR4-209ENST00000465036 MAP3K13O43283 966 aa15.51■□□□□ 0.07
UBR4-209ENST00000465036 FAM212AQ96EL1 285 aa15.48■□□□□ 0.07
UBR4-209ENST00000465036 C7P10643 843 aa15.46■□□□□ 0.07
UBR4-209ENST00000465036 SLC39A7Q92504 469 aa15.46■□□□□ 0.07
UBR4-209ENST00000465036 TIE1P35590 1138 aa15.44■□□□□ 0.06
UBR4-209ENST00000465036 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
UBR4-209ENST00000465036 ATN1P54259 1190 aaPredicted RBP15.4■□□□□ 0.06
UBR4-209ENST00000465036 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
UBR4-209ENST00000465036 METRNQ9UJH8 293 aa15.4■□□□□ 0.06
UBR4-209ENST00000465036 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
UBR4-209ENST00000465036 TRPC6Q9Y210 931 aa15.38■□□□□ 0.05
UBR4-209ENST00000465036 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
UBR4-209ENST00000465036 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
UBR4-209ENST00000465036 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
UBR4-209ENST00000465036 TTLL13PA6NNM8 815 aa15.31■□□□□ 0.04
UBR4-209ENST00000465036 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
UBR4-209ENST00000465036 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
UBR4-209ENST00000465036 GSE1Q14687 1217 aa15.26■□□□□ 0.03
UBR4-209ENST00000465036 IER5LQ5T953 404 aa15.23■□□□□ 0.03
UBR4-209ENST00000465036 MAMSTRQ6ZN01 415 aa15.22■□□□□ 0.03
UBR4-209ENST00000465036 POTEFA5A3E0 1075 aa15.2■□□□□ 0.02
UBR4-209ENST00000465036 POTEJP0CG39 1038 aa15.2■□□□□ 0.02
UBR4-209ENST00000465036 PYGBP11216 843 aa15.2■□□□□ 0.02
UBR4-209ENST00000465036 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
UBR4-209ENST00000465036 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
UBR4-209ENST00000465036 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
UBR4-209ENST00000465036 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
UBR4-209ENST00000465036 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
UBR4-209ENST00000465036 SEC24BO95487 1268 aa15.12■□□□□ 0.01
UBR4-209ENST00000465036 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
UBR4-209ENST00000465036 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
UBR4-209ENST00000465036 ZNF467Q7Z7K2 595 aaPredicted RBP15.09■□□□□ 0.01
UBR4-209ENST00000465036 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
UBR4-209ENST00000465036 IRX5P78411 483 aaPredicted RBP15.01□□□□□ -0.01
UBR4-209ENST00000465036 PLCG2P16885 1265 aa14.98□□□□□ -0.01
UBR4-209ENST00000465036 OCEL1Q9H607 264 aa14.95□□□□□ -0.02
UBR4-209ENST00000465036 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
UBR4-209ENST00000465036 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
UBR4-209ENST00000465036 PSEN1P49768 467 aa14.9□□□□□ -0.02
UBR4-209ENST00000465036 PDAP1Q13442 181 aaKnown RBP14.89□□□□□ -0.03
UBR4-209ENST00000465036 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
UBR4-209ENST00000465036 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
UBR4-209ENST00000465036 POTEMA6NI47 508 aa14.82□□□□□ -0.04
UBR4-209ENST00000465036 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
UBR4-209ENST00000465036 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
UBR4-209ENST00000465036 LCE2DQ5TA82 110 aaPredicted RBP14.78□□□□□ -0.04
UBR4-209ENST00000465036 ILDR1Q86SU0 546 aaPredicted RBP14.78□□□□□ -0.04
UBR4-209ENST00000465036 SLAIN1Q8ND83 568 aa14.76□□□□□ -0.05
UBR4-209ENST00000465036 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
UBR4-209ENST00000465036 L3MBTL3Q96JM7 780 aaPredicted RBP14.73□□□□□ -0.05
UBR4-209ENST00000465036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.73□□□□□ -0.052e-19■□□□□ 11.2
UBR4-209ENST00000465036 PCDH10Q9P2E7 1040 aa14.73□□□□□ -0.05
UBR4-209ENST00000465036 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.7□□□□□ -0.06
UBR4-209ENST00000465036 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
UBR4-209ENST00000465036 RIOK3O14730 519 aaKnown RBP14.63□□□□□ -0.07
UBR4-209ENST00000465036 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
UBR4-209ENST00000465036 SNPHO15079 494 aa14.6□□□□□ -0.07
UBR4-209ENST00000465036 RNF25Q96BH1 459 aaPredicted RBP14.6□□□□□ -0.07
UBR4-209ENST00000465036 VGFO15240 615 aaPredicted RBP14.58□□□□□ -0.08
UBR4-209ENST00000465036 ST18O60284 1047 aa14.57□□□□□ -0.08
UBR4-209ENST00000465036 DPY19L2Q6NUT2 758 aa14.55□□□□□ -0.08
UBR4-209ENST00000465036 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
UBR4-209ENST00000465036 TMEM121BQ9BXQ6 578 aaPredicted RBP14.53□□□□□ -0.08
UBR4-209ENST00000465036 BOLA1Q9Y3E2 137 aa14.53□□□□□ -0.08
UBR4-209ENST00000465036 PLSCR2Q9NRY7 297 aa14.52□□□□□ -0.09
UBR4-209ENST00000465036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.51□□□□□ -0.09
UBR4-209ENST00000465036 SOX12O15370 315 aa14.51□□□□□ -0.09
UBR4-209ENST00000465036 ZFP91Q96JP5 570 aaPredicted RBP14.51□□□□□ -0.09
UBR4-209ENST00000465036 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
UBR4-209ENST00000465036 G3V3G9 751 aa14.48□□□□□ -0.09
UBR4-209ENST00000465036 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
UBR4-209ENST00000465036 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
UBR4-209ENST00000465036 PKD2Q13563 968 aa14.38□□□□□ -0.11
UBR4-209ENST00000465036 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
UBR4-209ENST00000465036 BCL11BQ9C0K0 894 aaPredicted RBP14.35□□□□□ -0.11
UBR4-209ENST00000465036 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
UBR4-209ENST00000465036 PHF8Q9UPP1 1060 aa14.34□□□□□ -0.11
UBR4-209ENST00000465036 NLRP6P59044 892 aa14.32□□□□□ -0.12
UBR4-209ENST00000465036 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
UBR4-209ENST00000465036 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
UBR4-209ENST00000465036 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
UBR4-209ENST00000465036 STK25O00506 426 aa14.27□□□□□ -0.13
UBR4-209ENST00000465036 RGL2O15211 777 aa14.27□□□□□ -0.13
UBR4-209ENST00000465036 MARVELD3Q96A59 401 aa14.27□□□□□ -0.13
UBR4-209ENST00000465036 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
UBR4-209ENST00000465036 EMP3P54852 163 aa14.23□□□□□ -0.13
UBR4-209ENST00000465036 MFRPQ9BY79 579 aa14.23□□□□□ -0.13
UBR4-209ENST00000465036 TMEM92Q6UXU6 159 aa14.22□□□□□ -0.13
UBR4-209ENST00000465036 HOXB1P14653 301 aaPredicted RBP14.2□□□□□ -0.14
UBR4-209ENST00000465036 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
UBR4-209ENST00000465036 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms