RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 RGL2O15211 777 aa11.91□□□□□ -0.5
RAPGEF4-206ENST00000464976 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
RAPGEF4-206ENST00000464976 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
RAPGEF4-206ENST00000464976 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
RAPGEF4-206ENST00000464976 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF4-206ENST00000464976 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
RAPGEF4-206ENST00000464976 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
RAPGEF4-206ENST00000464976 GABBR2O75899 941 aa11.79□□□□□ -0.52
RAPGEF4-206ENST00000464976 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
RAPGEF4-206ENST00000464976 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
RAPGEF4-206ENST00000464976 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF4-206ENST00000464976 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF4-206ENST00000464976 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF4-206ENST00000464976 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF4-206ENST00000464976 PYGBP11216 843 aa11.72□□□□□ -0.53
RAPGEF4-206ENST00000464976 RIOK3O14730 519 aaKnown RBP11.71□□□□□ -0.53
RAPGEF4-206ENST00000464976 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF4-206ENST00000464976 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF4-206ENST00000464976 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
RAPGEF4-206ENST00000464976 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF4-206ENST00000464976 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
RAPGEF4-206ENST00000464976 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF4-206ENST00000464976 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF4-206ENST00000464976 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
RAPGEF4-206ENST00000464976 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
RAPGEF4-206ENST00000464976 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
RAPGEF4-206ENST00000464976 STK25O00506 426 aa11.6□□□□□ -0.55
RAPGEF4-206ENST00000464976 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
RAPGEF4-206ENST00000464976 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
RAPGEF4-206ENST00000464976 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
RAPGEF4-206ENST00000464976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF4-206ENST00000464976 CLCN6P51797 869 aa11.55□□□□□ -0.56
RAPGEF4-206ENST00000464976 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF4-206ENST00000464976 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF4-206ENST00000464976 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF4-206ENST00000464976 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
RAPGEF4-206ENST00000464976 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
RAPGEF4-206ENST00000464976 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
RAPGEF4-206ENST00000464976 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
RAPGEF4-206ENST00000464976 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF4-206ENST00000464976 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
RAPGEF4-206ENST00000464976 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
RAPGEF4-206ENST00000464976 PDAP1Q13442 181 aaKnown RBP11.46□□□□□ -0.57
RAPGEF4-206ENST00000464976 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF4-206ENST00000464976 MAP3K13O43283 966 aa11.45□□□□□ -0.58
RAPGEF4-206ENST00000464976 LHX8Q68G74 356 aa11.45□□□□□ -0.58
RAPGEF4-206ENST00000464976 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
RAPGEF4-206ENST00000464976 KIF12Q96FN5 646 aa11.44□□□□□ -0.58
RAPGEF4-206ENST00000464976 PSEN1P49768 467 aa11.43□□□□□ -0.58
RAPGEF4-206ENST00000464976 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
RAPGEF4-206ENST00000464976 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
RAPGEF4-206ENST00000464976 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
RAPGEF4-206ENST00000464976 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF4-206ENST00000464976 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
RAPGEF4-206ENST00000464976 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
RAPGEF4-206ENST00000464976 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
RAPGEF4-206ENST00000464976 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
RAPGEF4-206ENST00000464976 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
RAPGEF4-206ENST00000464976 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
RAPGEF4-206ENST00000464976 ASTLQ6HA08 431 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF4-206ENST00000464976 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
RAPGEF4-206ENST00000464976 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF4-206ENST00000464976 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
RAPGEF4-206ENST00000464976 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
RAPGEF4-206ENST00000464976 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
RAPGEF4-206ENST00000464976 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
RAPGEF4-206ENST00000464976 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
RAPGEF4-206ENST00000464976 SOX12O15370 315 aa11.2□□□□□ -0.62
RAPGEF4-206ENST00000464976 BCANQ96GW7 911 aa11.2□□□□□ -0.62
RAPGEF4-206ENST00000464976 NLRP6P59044 892 aa11.19□□□□□ -0.62
RAPGEF4-206ENST00000464976 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
RAPGEF4-206ENST00000464976 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF4-206ENST00000464976 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF4-206ENST00000464976 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
RAPGEF4-206ENST00000464976 TIE1P35590 1138 aa11.14□□□□□ -0.63
RAPGEF4-206ENST00000464976 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
RAPGEF4-206ENST00000464976 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
RAPGEF4-206ENST00000464976 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
RAPGEF4-206ENST00000464976 TTLL13PA6NNM8 815 aa11.12□□□□□ -0.63
RAPGEF4-206ENST00000464976 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
RAPGEF4-206ENST00000464976 PPP1R37O75864 691 aa11.11□□□□□ -0.63
RAPGEF4-206ENST00000464976 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
RAPGEF4-206ENST00000464976 C7P10643 843 aa11.1□□□□□ -0.63
RAPGEF4-206ENST00000464976 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
RAPGEF4-206ENST00000464976 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
RAPGEF4-206ENST00000464976 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
RAPGEF4-206ENST00000464976 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
RAPGEF4-206ENST00000464976 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
RAPGEF4-206ENST00000464976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAPGEF4-206ENST00000464976 NBR1Q14596 966 aa11.03□□□□□ -0.64
RAPGEF4-206ENST00000464976 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
RAPGEF4-206ENST00000464976 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
RAPGEF4-206ENST00000464976 ILDR1Q86SU0 546 aaPredicted RBP10.93□□□□□ -0.66
RAPGEF4-206ENST00000464976 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
RAPGEF4-206ENST00000464976 PDE4AP27815 886 aa10.91□□□□□ -0.66
RAPGEF4-206ENST00000464976 IER5LQ5T953 404 aa10.91□□□□□ -0.66
RAPGEF4-206ENST00000464976 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
RAPGEF4-206ENST00000464976 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
RAPGEF4-206ENST00000464976 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
RAPGEF4-206ENST00000464976 OCEL1Q9H607 264 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms