RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
GARNL3-213ENST00000464616 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
GARNL3-213ENST00000464616 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
GARNL3-213ENST00000464616 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
GARNL3-213ENST00000464616 MS4A3Q96HJ5 214 aa10.38□□□□□ -0.75
GARNL3-213ENST00000464616 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
GARNL3-213ENST00000464616 NUBP1P53384 320 aa10.35□□□□□ -0.75
GARNL3-213ENST00000464616 KIF12Q96FN5 646 aa10.35□□□□□ -0.75
GARNL3-213ENST00000464616 LHX8Q68G74 356 aa10.34□□□□□ -0.75
GARNL3-213ENST00000464616 MAP3K13O43283 966 aa10.32□□□□□ -0.76
GARNL3-213ENST00000464616 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
GARNL3-213ENST00000464616 GSE1Q14687 1217 aa10.27□□□□□ -0.77
GARNL3-213ENST00000464616 SGIP1Q9BQI5 828 aa10.26□□□□□ -0.77
GARNL3-213ENST00000464616 ATMINO43313 823 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-213ENST00000464616 PYGBP11216 843 aa10.23□□□□□ -0.77
GARNL3-213ENST00000464616 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-213ENST00000464616 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
GARNL3-213ENST00000464616 SPOCK2Q92563 424 aa10.23□□□□□ -0.77
GARNL3-213ENST00000464616 C7P10643 843 aa10.21□□□□□ -0.77
GARNL3-213ENST00000464616 TIE1P35590 1138 aa10.21□□□□□ -0.77
GARNL3-213ENST00000464616 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-213ENST00000464616 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
GARNL3-213ENST00000464616 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-213ENST00000464616 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-213ENST00000464616 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-213ENST00000464616 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
GARNL3-213ENST00000464616 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
GARNL3-213ENST00000464616 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
GARNL3-213ENST00000464616 SEC24BO95487 1268 aa10.15□□□□□ -0.78
GARNL3-213ENST00000464616 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
GARNL3-213ENST00000464616 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
GARNL3-213ENST00000464616 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-213ENST00000464616 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
GARNL3-213ENST00000464616 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
GARNL3-213ENST00000464616 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
GARNL3-213ENST00000464616 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
GARNL3-213ENST00000464616 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-213ENST00000464616 IER5LQ5T953 404 aa10.05□□□□□ -0.8
GARNL3-213ENST00000464616 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
GARNL3-213ENST00000464616 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
GARNL3-213ENST00000464616 PLCG2P16885 1265 aa10.03□□□□□ -0.8
GARNL3-213ENST00000464616 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
GARNL3-213ENST00000464616 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
GARNL3-213ENST00000464616 OTUD5Q96G74 571 aa10□□□□□ -0.81
GARNL3-213ENST00000464616 PSEN1P49768 467 aa9.99□□□□□ -0.81
GARNL3-213ENST00000464616 PDAP1Q13442 181 aaKnown RBP9.98□□□□□ -0.81
GARNL3-213ENST00000464616 COLQQ9Y215 455 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-213ENST00000464616 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
GARNL3-213ENST00000464616 POTEFA5A3E0 1075 aa9.93□□□□□ -0.82
GARNL3-213ENST00000464616 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
GARNL3-213ENST00000464616 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-213ENST00000464616 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
GARNL3-213ENST00000464616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.88□□□□□ -0.838e-9■■■■■ 33.7
GARNL3-213ENST00000464616 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
GARNL3-213ENST00000464616 G3V3G9 751 aa9.87□□□□□ -0.83
GARNL3-213ENST00000464616 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
GARNL3-213ENST00000464616 SLAIN1Q8ND83 568 aa9.84□□□□□ -0.83
GARNL3-213ENST00000464616 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-213ENST00000464616 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.83□□□□□ -0.84
GARNL3-213ENST00000464616 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-213ENST00000464616 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-213ENST00000464616 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
GARNL3-213ENST00000464616 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-213ENST00000464616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-213ENST00000464616 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
GARNL3-213ENST00000464616 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
GARNL3-213ENST00000464616 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-213ENST00000464616 POTEMA6NI47 508 aa9.73□□□□□ -0.85
GARNL3-213ENST00000464616 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-213ENST00000464616 SNPHO15079 494 aa9.72□□□□□ -0.85
GARNL3-213ENST00000464616 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
GARNL3-213ENST00000464616 POTEGQ6S5H5 508 aa9.71□□□□□ -0.86
GARNL3-213ENST00000464616 STK25O00506 426 aa9.7□□□□□ -0.86
GARNL3-213ENST00000464616 SOX12O15370 315 aa9.7□□□□□ -0.86
GARNL3-213ENST00000464616 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-213ENST00000464616 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
GARNL3-213ENST00000464616 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
GARNL3-213ENST00000464616 PKD2Q13563 968 aa9.66□□□□□ -0.86
GARNL3-213ENST00000464616 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-213ENST00000464616 RGL2O15211 777 aa9.64□□□□□ -0.87
GARNL3-213ENST00000464616 NLRP6P59044 892 aa9.64□□□□□ -0.87
GARNL3-213ENST00000464616 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
GARNL3-213ENST00000464616 ST18O60284 1047 aa9.6□□□□□ -0.87
GARNL3-213ENST00000464616 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
GARNL3-213ENST00000464616 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
GARNL3-213ENST00000464616 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-213ENST00000464616 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
GARNL3-213ENST00000464616 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
GARNL3-213ENST00000464616 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-213ENST00000464616 RIMBP2O15034 1052 aa9.53□□□□□ -0.88
GARNL3-213ENST00000464616 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
GARNL3-213ENST00000464616 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
GARNL3-213ENST00000464616 DCAF8L2P0C7V8 631 aa9.51□□□□□ -0.89
GARNL3-213ENST00000464616 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
GARNL3-213ENST00000464616 EMP3P54852 163 aa9.5□□□□□ -0.89
GARNL3-213ENST00000464616 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
GARNL3-213ENST00000464616 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
GARNL3-213ENST00000464616 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
GARNL3-213ENST00000464616 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
GARNL3-213ENST00000464616 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms