RNA–Protein interactions for RNA: ENST00000464414.1

PRUNE2-209, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 659 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-209ENST00000464414 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
PRUNE2-209ENST00000464414 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
PRUNE2-209ENST00000464414 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
PRUNE2-209ENST00000464414 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
PRUNE2-209ENST00000464414 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
PRUNE2-209ENST00000464414 FKBP8Q14318 412 aa12.11□□□□□ -0.47
PRUNE2-209ENST00000464414 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
PRUNE2-209ENST00000464414 C7P10643 843 aa12.08□□□□□ -0.48
PRUNE2-209ENST00000464414 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
PRUNE2-209ENST00000464414 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
PRUNE2-209ENST00000464414 MAP3K13O43283 966 aa12.06□□□□□ -0.48
PRUNE2-209ENST00000464414 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
PRUNE2-209ENST00000464414 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
PRUNE2-209ENST00000464414 NUBP1P53384 320 aa12.03□□□□□ -0.48
PRUNE2-209ENST00000464414 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
PRUNE2-209ENST00000464414 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
PRUNE2-209ENST00000464414 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
PRUNE2-209ENST00000464414 TIE1P35590 1138 aa11.99□□□□□ -0.49
PRUNE2-209ENST00000464414 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
PRUNE2-209ENST00000464414 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
PRUNE2-209ENST00000464414 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
PRUNE2-209ENST00000464414 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
PRUNE2-209ENST00000464414 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
PRUNE2-209ENST00000464414 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
PRUNE2-209ENST00000464414 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
PRUNE2-209ENST00000464414 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
PRUNE2-209ENST00000464414 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
PRUNE2-209ENST00000464414 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
PRUNE2-209ENST00000464414 IER5LQ5T953 404 aa11.82□□□□□ -0.52
PRUNE2-209ENST00000464414 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
PRUNE2-209ENST00000464414 SEC24BO95487 1268 aa11.8□□□□□ -0.52
PRUNE2-209ENST00000464414 DCAF8Q5TAQ9 597 aa11.8□□□□□ -0.52
PRUNE2-209ENST00000464414 POTEMA6NI47 508 aa11.79□□□□□ -0.52
PRUNE2-209ENST00000464414 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
PRUNE2-209ENST00000464414 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
PRUNE2-209ENST00000464414 PYGBP11216 843 aa11.75□□□□□ -0.53
PRUNE2-209ENST00000464414 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
PRUNE2-209ENST00000464414 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
PRUNE2-209ENST00000464414 LCE2DQ5TA82 110 aaPredicted RBP11.71□□□□□ -0.53
PRUNE2-209ENST00000464414 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
PRUNE2-209ENST00000464414 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
PRUNE2-209ENST00000464414 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
PRUNE2-209ENST00000464414 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
PRUNE2-209ENST00000464414 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
PRUNE2-209ENST00000464414 GSE1Q14687 1217 aa11.67□□□□□ -0.54
PRUNE2-209ENST00000464414 PLCG2P16885 1265 aa11.65□□□□□ -0.54
PRUNE2-209ENST00000464414 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
PRUNE2-209ENST00000464414 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
PRUNE2-209ENST00000464414 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
PRUNE2-209ENST00000464414 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
PRUNE2-209ENST00000464414 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
PRUNE2-209ENST00000464414 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
PRUNE2-209ENST00000464414 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
PRUNE2-209ENST00000464414 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
PRUNE2-209ENST00000464414 PSEN1P49768 467 aa11.49□□□□□ -0.57
PRUNE2-209ENST00000464414 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
PRUNE2-209ENST00000464414 ST18O60284 1047 aa11.47□□□□□ -0.57
PRUNE2-209ENST00000464414 GOLGA2Q08379 1002 aa11.47□□□□□ -0.57
PRUNE2-209ENST00000464414 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
PRUNE2-209ENST00000464414 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
PRUNE2-209ENST00000464414 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
PRUNE2-209ENST00000464414 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
PRUNE2-209ENST00000464414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRUNE2-209ENST00000464414 L3MBTL3Q96JM7 780 aaPredicted RBP11.41□□□□□ -0.58
PRUNE2-209ENST00000464414 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
PRUNE2-209ENST00000464414 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
PRUNE2-209ENST00000464414 SNPHO15079 494 aa11.39□□□□□ -0.59
PRUNE2-209ENST00000464414 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
PRUNE2-209ENST00000464414 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
PRUNE2-209ENST00000464414 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
PRUNE2-209ENST00000464414 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
PRUNE2-209ENST00000464414 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
PRUNE2-209ENST00000464414 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
PRUNE2-209ENST00000464414 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
PRUNE2-209ENST00000464414 G3V3G9 751 aa11.21□□□□□ -0.61
PRUNE2-209ENST00000464414 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
PRUNE2-209ENST00000464414 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
PRUNE2-209ENST00000464414 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
PRUNE2-209ENST00000464414 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
PRUNE2-209ENST00000464414 EMP3P54852 163 aa11.16□□□□□ -0.62
PRUNE2-209ENST00000464414 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
PRUNE2-209ENST00000464414 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
PRUNE2-209ENST00000464414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 SOX12O15370 315 aa11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
PRUNE2-209ENST00000464414 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
PRUNE2-209ENST00000464414 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
PRUNE2-209ENST00000464414 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
PRUNE2-209ENST00000464414 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
PRUNE2-209ENST00000464414 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
PRUNE2-209ENST00000464414 PKD2Q13563 968 aa11.06□□□□□ -0.64
PRUNE2-209ENST00000464414 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
PRUNE2-209ENST00000464414 HOXB1P14653 301 aaPredicted RBP11.05□□□□□ -0.64
PRUNE2-209ENST00000464414 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
PRUNE2-209ENST00000464414 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
PRUNE2-209ENST00000464414 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
PRUNE2-209ENST00000464414 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms