RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 C7P10643 843 aa13.24□□□□□ -0.29
ITM2B-203ENST00000463839 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
ITM2B-203ENST00000463839 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
ITM2B-203ENST00000463839 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
ITM2B-203ENST00000463839 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
ITM2B-203ENST00000463839 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
ITM2B-203ENST00000463839 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
ITM2B-203ENST00000463839 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
ITM2B-203ENST00000463839 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
ITM2B-203ENST00000463839 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
ITM2B-203ENST00000463839 POTEMA6NI47 508 aa13.08□□□□□ -0.32
ITM2B-203ENST00000463839 MIER1Q8N108 512 aa13.08□□□□□ -0.32
ITM2B-203ENST00000463839 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
ITM2B-203ENST00000463839 BMP2KQ9NSY1 1161 aaPredicted RBP13.07□□□□□ -0.32
ITM2B-203ENST00000463839 TIE1P35590 1138 aa13.05□□□□□ -0.32
ITM2B-203ENST00000463839 MAP3K13O43283 966 aa13.04□□□□□ -0.32
ITM2B-203ENST00000463839 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
ITM2B-203ENST00000463839 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
ITM2B-203ENST00000463839 POTEFA5A3E0 1075 aa13.02□□□□□ -0.33
ITM2B-203ENST00000463839 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
ITM2B-203ENST00000463839 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
ITM2B-203ENST00000463839 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
ITM2B-203ENST00000463839 LCE2DQ5TA82 110 aaPredicted RBP12.95□□□□□ -0.34
ITM2B-203ENST00000463839 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
ITM2B-203ENST00000463839 NUBP1P53384 320 aa12.94□□□□□ -0.34
ITM2B-203ENST00000463839 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
ITM2B-203ENST00000463839 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
ITM2B-203ENST00000463839 IER5LQ5T953 404 aa12.9□□□□□ -0.34
ITM2B-203ENST00000463839 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
ITM2B-203ENST00000463839 PCDHB13Q9Y5F0 798 aa12.86□□□□□ -0.35
ITM2B-203ENST00000463839 SEC24BO95487 1268 aa12.83□□□□□ -0.36
ITM2B-203ENST00000463839 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
ITM2B-203ENST00000463839 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
ITM2B-203ENST00000463839 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
ITM2B-203ENST00000463839 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
ITM2B-203ENST00000463839 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
ITM2B-203ENST00000463839 FKBP8Q14318 412 aa12.72□□□□□ -0.37
ITM2B-203ENST00000463839 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
ITM2B-203ENST00000463839 PLCG2P16885 1265 aa12.65□□□□□ -0.38
ITM2B-203ENST00000463839 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
ITM2B-203ENST00000463839 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
ITM2B-203ENST00000463839 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
ITM2B-203ENST00000463839 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
ITM2B-203ENST00000463839 PYGBP11216 843 aa12.59□□□□□ -0.39
ITM2B-203ENST00000463839 ST18O60284 1047 aa12.58□□□□□ -0.4
ITM2B-203ENST00000463839 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
ITM2B-203ENST00000463839 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
ITM2B-203ENST00000463839 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
ITM2B-203ENST00000463839 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
ITM2B-203ENST00000463839 GSE1Q14687 1217 aa12.49□□□□□ -0.41
ITM2B-203ENST00000463839 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
ITM2B-203ENST00000463839 SNPHO15079 494 aa12.46□□□□□ -0.41
ITM2B-203ENST00000463839 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
ITM2B-203ENST00000463839 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
ITM2B-203ENST00000463839 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
ITM2B-203ENST00000463839 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
ITM2B-203ENST00000463839 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
ITM2B-203ENST00000463839 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
ITM2B-203ENST00000463839 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
ITM2B-203ENST00000463839 PSEN1P49768 467 aa12.35□□□□□ -0.43
ITM2B-203ENST00000463839 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
ITM2B-203ENST00000463839 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
ITM2B-203ENST00000463839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
ITM2B-203ENST00000463839 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
ITM2B-203ENST00000463839 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
ITM2B-203ENST00000463839 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
ITM2B-203ENST00000463839 PDAP1Q13442 181 aaKnown RBP12.28□□□□□ -0.44
ITM2B-203ENST00000463839 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
ITM2B-203ENST00000463839 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
ITM2B-203ENST00000463839 EMP3P54852 163 aa12.2□□□□□ -0.46
ITM2B-203ENST00000463839 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
ITM2B-203ENST00000463839 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
ITM2B-203ENST00000463839 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
ITM2B-203ENST00000463839 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
ITM2B-203ENST00000463839 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
ITM2B-203ENST00000463839 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
ITM2B-203ENST00000463839 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
ITM2B-203ENST00000463839 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
ITM2B-203ENST00000463839 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
ITM2B-203ENST00000463839 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
ITM2B-203ENST00000463839 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
ITM2B-203ENST00000463839 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
ITM2B-203ENST00000463839 G3V3G9 751 aa12.07□□□□□ -0.48
ITM2B-203ENST00000463839 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
ITM2B-203ENST00000463839 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
ITM2B-203ENST00000463839 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
ITM2B-203ENST00000463839 ZNF710Q8N1W2 664 aa11.98□□□□□ -0.49
ITM2B-203ENST00000463839 SOX12O15370 315 aa11.94□□□□□ -0.5
ITM2B-203ENST00000463839 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
ITM2B-203ENST00000463839 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
ITM2B-203ENST00000463839 TMEM92Q6UXU6 159 aa11.93□□□□□ -0.5
ITM2B-203ENST00000463839 ERBB3P21860 1342 aa11.92□□□□□ -0.5
ITM2B-203ENST00000463839 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
ITM2B-203ENST00000463839 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
ITM2B-203ENST00000463839 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
ITM2B-203ENST00000463839 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
ITM2B-203ENST00000463839 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
ITM2B-203ENST00000463839 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
ITM2B-203ENST00000463839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
ITM2B-203ENST00000463839 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms