RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
USP9X-204ENST00000463829 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
USP9X-204ENST00000463829 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
USP9X-204ENST00000463829 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
USP9X-204ENST00000463829 ASTLQ6HA08 431 aaPredicted RBP11.69□□□□□ -0.54
USP9X-204ENST00000463829 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
USP9X-204ENST00000463829 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
USP9X-204ENST00000463829 MAP3K13O43283 966 aa11.66□□□□□ -0.54
USP9X-204ENST00000463829 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
USP9X-204ENST00000463829 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
USP9X-204ENST00000463829 C7P10643 843 aa11.65□□□□□ -0.54
USP9X-204ENST00000463829 NUBP1P53384 320 aa11.65□□□□□ -0.54
USP9X-204ENST00000463829 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
USP9X-204ENST00000463829 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
USP9X-204ENST00000463829 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
USP9X-204ENST00000463829 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
USP9X-204ENST00000463829 TIE1P35590 1138 aa11.59□□□□□ -0.55
USP9X-204ENST00000463829 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
USP9X-204ENST00000463829 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
USP9X-204ENST00000463829 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
USP9X-204ENST00000463829 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
USP9X-204ENST00000463829 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
USP9X-204ENST00000463829 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
USP9X-204ENST00000463829 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
USP9X-204ENST00000463829 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
USP9X-204ENST00000463829 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
USP9X-204ENST00000463829 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
USP9X-204ENST00000463829 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
USP9X-204ENST00000463829 TTLL13PA6NNM8 815 aa11.49□□□□□ -0.57
USP9X-204ENST00000463829 SEC24BO95487 1268 aa11.48□□□□□ -0.57
USP9X-204ENST00000463829 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
USP9X-204ENST00000463829 GSE1Q14687 1217 aa11.46□□□□□ -0.57
USP9X-204ENST00000463829 PYGBP11216 843 aa11.45□□□□□ -0.58
USP9X-204ENST00000463829 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
USP9X-204ENST00000463829 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
USP9X-204ENST00000463829 TMEM106CQ9BVX2 250 aa11.43□□□□□ -0.58
USP9X-204ENST00000463829 IER5LQ5T953 404 aa11.42□□□□□ -0.58
USP9X-204ENST00000463829 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
USP9X-204ENST00000463829 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
USP9X-204ENST00000463829 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
USP9X-204ENST00000463829 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
USP9X-204ENST00000463829 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
USP9X-204ENST00000463829 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
USP9X-204ENST00000463829 PLCG2P16885 1265 aa11.33□□□□□ -0.6
USP9X-204ENST00000463829 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
USP9X-204ENST00000463829 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
USP9X-204ENST00000463829 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
USP9X-204ENST00000463829 FAM163AQ96GL9 167 aaPredicted RBP11.25□□□□□ -0.61
USP9X-204ENST00000463829 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
USP9X-204ENST00000463829 POTEMA6NI47 508 aa11.24□□□□□ -0.61
USP9X-204ENST00000463829 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
USP9X-204ENST00000463829 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
USP9X-204ENST00000463829 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
USP9X-204ENST00000463829 PSEN1P49768 467 aa11.21□□□□□ -0.61
USP9X-204ENST00000463829 PKD2Q13563 968 aa11.2□□□□□ -0.62
USP9X-204ENST00000463829 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
USP9X-204ENST00000463829 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
USP9X-204ENST00000463829 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
USP9X-204ENST00000463829 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
USP9X-204ENST00000463829 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
USP9X-204ENST00000463829 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
USP9X-204ENST00000463829 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
USP9X-204ENST00000463829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.639e-9■■□□□ 12.4
USP9X-204ENST00000463829 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
USP9X-204ENST00000463829 SNPHO15079 494 aa11.07□□□□□ -0.64
USP9X-204ENST00000463829 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
USP9X-204ENST00000463829 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
USP9X-204ENST00000463829 C3orf67Q6ZVT6 689 aa11.06□□□□□ -0.64
USP9X-204ENST00000463829 PDCD7Q8N8D1 485 aaKnown RBP11.06□□□□□ -0.64
USP9X-204ENST00000463829 G3V3G9 751 aa11.04□□□□□ -0.64
USP9X-204ENST00000463829 DCAF8L2P0C7V8 631 aa11.04□□□□□ -0.64
USP9X-204ENST00000463829 ST18O60284 1047 aa10.99□□□□□ -0.65
USP9X-204ENST00000463829 RGL2O15211 777 aa10.96□□□□□ -0.65
USP9X-204ENST00000463829 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
USP9X-204ENST00000463829 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
USP9X-204ENST00000463829 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
USP9X-204ENST00000463829 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
USP9X-204ENST00000463829 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
USP9X-204ENST00000463829 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
USP9X-204ENST00000463829 CDAN1Q8IWY9 1227 aa10.92□□□□□ -0.66
USP9X-204ENST00000463829 EFCAB3Q8N7B9 438 aa10.92□□□□□ -0.66
USP9X-204ENST00000463829 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
USP9X-204ENST00000463829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
USP9X-204ENST00000463829 SOX12O15370 315 aa10.87□□□□□ -0.67
USP9X-204ENST00000463829 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
USP9X-204ENST00000463829 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
USP9X-204ENST00000463829 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
USP9X-204ENST00000463829 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
USP9X-204ENST00000463829 EMP3P54852 163 aa10.8□□□□□ -0.68
USP9X-204ENST00000463829 BBXQ8WY36 941 aaPredicted RBP10.8□□□□□ -0.68
USP9X-204ENST00000463829 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
USP9X-204ENST00000463829 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
USP9X-204ENST00000463829 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
USP9X-204ENST00000463829 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
USP9X-204ENST00000463829 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
USP9X-204ENST00000463829 NLRP6P59044 892 aa10.76□□□□□ -0.69
USP9X-204ENST00000463829 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
USP9X-204ENST00000463829 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
USP9X-204ENST00000463829 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
USP9X-204ENST00000463829 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms