RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
TM9SF2-202ENST00000463709 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
TM9SF2-202ENST00000463709 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
TM9SF2-202ENST00000463709 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
TM9SF2-202ENST00000463709 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
TM9SF2-202ENST00000463709 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
TM9SF2-202ENST00000463709 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
TM9SF2-202ENST00000463709 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
TM9SF2-202ENST00000463709 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
TM9SF2-202ENST00000463709 MAP3K13O43283 966 aa13.15□□□□□ -0.3
TM9SF2-202ENST00000463709 RTN4Q9NQC3 1192 aaKnown RBP13.15□□□□□ -0.3
TM9SF2-202ENST00000463709 NUBP1P53384 320 aa13.14□□□□□ -0.31
TM9SF2-202ENST00000463709 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
TM9SF2-202ENST00000463709 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
TM9SF2-202ENST00000463709 C7P10643 843 aa13.12□□□□□ -0.31
TM9SF2-202ENST00000463709 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
TM9SF2-202ENST00000463709 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
TM9SF2-202ENST00000463709 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
TM9SF2-202ENST00000463709 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
TM9SF2-202ENST00000463709 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
TM9SF2-202ENST00000463709 TIE1P35590 1138 aa13.07□□□□□ -0.32
TM9SF2-202ENST00000463709 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
TM9SF2-202ENST00000463709 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
TM9SF2-202ENST00000463709 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
TM9SF2-202ENST00000463709 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
TM9SF2-202ENST00000463709 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
TM9SF2-202ENST00000463709 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
TM9SF2-202ENST00000463709 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
TM9SF2-202ENST00000463709 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
TM9SF2-202ENST00000463709 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
TM9SF2-202ENST00000463709 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
TM9SF2-202ENST00000463709 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
TM9SF2-202ENST00000463709 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
TM9SF2-202ENST00000463709 IER5LQ5T953 404 aa12.87□□□□□ -0.35
TM9SF2-202ENST00000463709 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
TM9SF2-202ENST00000463709 SEC24BO95487 1268 aa12.86□□□□□ -0.35
TM9SF2-202ENST00000463709 PYGBP11216 843 aa12.86□□□□□ -0.35
TM9SF2-202ENST00000463709 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
TM9SF2-202ENST00000463709 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
TM9SF2-202ENST00000463709 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
TM9SF2-202ENST00000463709 GSE1Q14687 1217 aa12.79□□□□□ -0.36
TM9SF2-202ENST00000463709 PCDHB8Q9UN66 801 aa12.77□□□□□ -0.37
TM9SF2-202ENST00000463709 POTEMA6NI47 508 aa12.75□□□□□ -0.37
TM9SF2-202ENST00000463709 PKD2Q13563 968 aa12.72□□□□□ -0.37
TM9SF2-202ENST00000463709 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
TM9SF2-202ENST00000463709 PLCG2P16885 1265 aa12.71□□□□□ -0.37
TM9SF2-202ENST00000463709 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
TM9SF2-202ENST00000463709 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-202ENST00000463709 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-202ENST00000463709 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-202ENST00000463709 LCE2DQ5TA82 110 aaPredicted RBP12.67□□□□□ -0.38
TM9SF2-202ENST00000463709 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
TM9SF2-202ENST00000463709 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
TM9SF2-202ENST00000463709 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
TM9SF2-202ENST00000463709 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
TM9SF2-202ENST00000463709 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
TM9SF2-202ENST00000463709 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
TM9SF2-202ENST00000463709 PSEN1P49768 467 aa12.57□□□□□ -0.4
TM9SF2-202ENST00000463709 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
TM9SF2-202ENST00000463709 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
TM9SF2-202ENST00000463709 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
TM9SF2-202ENST00000463709 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
TM9SF2-202ENST00000463709 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
TM9SF2-202ENST00000463709 RGL2O15211 777 aa12.51□□□□□ -0.41
TM9SF2-202ENST00000463709 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
TM9SF2-202ENST00000463709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.411e-8■□□□□ 11.3
TM9SF2-202ENST00000463709 ST18O60284 1047 aa12.44□□□□□ -0.42
TM9SF2-202ENST00000463709 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
TM9SF2-202ENST00000463709 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
TM9SF2-202ENST00000463709 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
TM9SF2-202ENST00000463709 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
TM9SF2-202ENST00000463709 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
TM9SF2-202ENST00000463709 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
TM9SF2-202ENST00000463709 SNPHO15079 494 aa12.38□□□□□ -0.43
TM9SF2-202ENST00000463709 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
TM9SF2-202ENST00000463709 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
TM9SF2-202ENST00000463709 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-202ENST00000463709 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
TM9SF2-202ENST00000463709 G3V3G9 751 aa12.27□□□□□ -0.45
TM9SF2-202ENST00000463709 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
TM9SF2-202ENST00000463709 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
TM9SF2-202ENST00000463709 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
TM9SF2-202ENST00000463709 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
TM9SF2-202ENST00000463709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-202ENST00000463709 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-202ENST00000463709 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
TM9SF2-202ENST00000463709 SOX12O15370 315 aa12.17□□□□□ -0.46
TM9SF2-202ENST00000463709 EMP3P54852 163 aa12.16□□□□□ -0.46
TM9SF2-202ENST00000463709 STK25O00506 426 aa12.15□□□□□ -0.46
TM9SF2-202ENST00000463709 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
TM9SF2-202ENST00000463709 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
TM9SF2-202ENST00000463709 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
TM9SF2-202ENST00000463709 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
TM9SF2-202ENST00000463709 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
TM9SF2-202ENST00000463709 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms