RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
U2AF1-205ENST00000463599 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
U2AF1-205ENST00000463599 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
U2AF1-205ENST00000463599 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
U2AF1-205ENST00000463599 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
U2AF1-205ENST00000463599 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
U2AF1-205ENST00000463599 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
U2AF1-205ENST00000463599 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
U2AF1-205ENST00000463599 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
U2AF1-205ENST00000463599 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
U2AF1-205ENST00000463599 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
U2AF1-205ENST00000463599 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
U2AF1-205ENST00000463599 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
U2AF1-205ENST00000463599 STK25O00506 426 aa13.27□□□□□ -0.29
U2AF1-205ENST00000463599 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
U2AF1-205ENST00000463599 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
U2AF1-205ENST00000463599 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
U2AF1-205ENST00000463599 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
U2AF1-205ENST00000463599 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
U2AF1-205ENST00000463599 NBR1Q14596 966 aa13.21□□□□□ -0.29
U2AF1-205ENST00000463599 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
U2AF1-205ENST00000463599 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
U2AF1-205ENST00000463599 PYGBP11216 843 aa13.16□□□□□ -0.3
U2AF1-205ENST00000463599 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
U2AF1-205ENST00000463599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
U2AF1-205ENST00000463599 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
U2AF1-205ENST00000463599 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
U2AF1-205ENST00000463599 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
U2AF1-205ENST00000463599 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
U2AF1-205ENST00000463599 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
U2AF1-205ENST00000463599 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
U2AF1-205ENST00000463599 PDAP1Q13442 181 aaKnown RBP12.96□□□□□ -0.33
U2AF1-205ENST00000463599 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
U2AF1-205ENST00000463599 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
U2AF1-205ENST00000463599 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
U2AF1-205ENST00000463599 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
U2AF1-205ENST00000463599 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
U2AF1-205ENST00000463599 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
U2AF1-205ENST00000463599 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
U2AF1-205ENST00000463599 PSEN1P49768 467 aa12.85□□□□□ -0.35
U2AF1-205ENST00000463599 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
U2AF1-205ENST00000463599 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
U2AF1-205ENST00000463599 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
U2AF1-205ENST00000463599 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
U2AF1-205ENST00000463599 POTEHQ6S545 545 aa12.77□□□□□ -0.37
U2AF1-205ENST00000463599 SOX12O15370 315 aa12.73□□□□□ -0.37
U2AF1-205ENST00000463599 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
U2AF1-205ENST00000463599 NLRP6P59044 892 aa12.72□□□□□ -0.37
U2AF1-205ENST00000463599 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
U2AF1-205ENST00000463599 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
U2AF1-205ENST00000463599 MAP3K13O43283 966 aa12.7□□□□□ -0.38
U2AF1-205ENST00000463599 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
U2AF1-205ENST00000463599 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
U2AF1-205ENST00000463599 PPP1R37O75864 691 aa12.66□□□□□ -0.38
U2AF1-205ENST00000463599 FBXO22Q8NEZ5 403 aa12.66□□□□□ -0.38
U2AF1-205ENST00000463599 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-205ENST00000463599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
U2AF1-205ENST00000463599 ARHGEF1Q92888 912 aaKnown RBP12.64□□□□□ -0.39
U2AF1-205ENST00000463599 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
U2AF1-205ENST00000463599 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
U2AF1-205ENST00000463599 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
U2AF1-205ENST00000463599 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
U2AF1-205ENST00000463599 E2F4Q16254 413 aa12.61□□□□□ -0.39
U2AF1-205ENST00000463599 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
U2AF1-205ENST00000463599 PDE4AP27815 886 aa12.55□□□□□ -0.4
U2AF1-205ENST00000463599 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
U2AF1-205ENST00000463599 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
U2AF1-205ENST00000463599 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
U2AF1-205ENST00000463599 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
U2AF1-205ENST00000463599 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
U2AF1-205ENST00000463599 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
U2AF1-205ENST00000463599 NCKAP5LQ9HCH0 1330 aa12.48□□□□□ -0.41
U2AF1-205ENST00000463599 MS4A4AQ96JQ5 239 aa12.47□□□□□ -0.41
U2AF1-205ENST00000463599 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
U2AF1-205ENST00000463599 TESPA1A2RU30 521 aaPredicted RBP12.46□□□□□ -0.41
U2AF1-205ENST00000463599 SEMA3EO15041 775 aa12.46□□□□□ -0.41
U2AF1-205ENST00000463599 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
U2AF1-205ENST00000463599 MFSD10Q14728 455 aa12.45□□□□□ -0.42
U2AF1-205ENST00000463599 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
U2AF1-205ENST00000463599 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
U2AF1-205ENST00000463599 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
U2AF1-205ENST00000463599 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
U2AF1-205ENST00000463599 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
U2AF1-205ENST00000463599 ARIH1Q9Y4X5 557 aaPredicted RBP12.42□□□□□ -0.42
U2AF1-205ENST00000463599 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
U2AF1-205ENST00000463599 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
U2AF1-205ENST00000463599 TIE1P35590 1138 aa12.34□□□□□ -0.43
U2AF1-205ENST00000463599 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
U2AF1-205ENST00000463599 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
U2AF1-205ENST00000463599 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
U2AF1-205ENST00000463599 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
U2AF1-205ENST00000463599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
U2AF1-205ENST00000463599 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
U2AF1-205ENST00000463599 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
U2AF1-205ENST00000463599 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
U2AF1-205ENST00000463599 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
U2AF1-205ENST00000463599 ZMYND10O75800 440 aa12.29□□□□□ -0.44
U2AF1-205ENST00000463599 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
U2AF1-205ENST00000463599 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
U2AF1-205ENST00000463599 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms