RNA–Protein interactions for RNA: ENST00000463378.5

RBBP4-208, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-208ENST00000463378 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
RBBP4-208ENST00000463378 RNF25Q96BH1 459 aaPredicted RBP12.48□□□□□ -0.41
RBBP4-208ENST00000463378 NUBP1P53384 320 aa12.47□□□□□ -0.41
RBBP4-208ENST00000463378 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
RBBP4-208ENST00000463378 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
RBBP4-208ENST00000463378 STK25O00506 426 aa12.41□□□□□ -0.42
RBBP4-208ENST00000463378 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
RBBP4-208ENST00000463378 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
RBBP4-208ENST00000463378 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
RBBP4-208ENST00000463378 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
RBBP4-208ENST00000463378 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
RBBP4-208ENST00000463378 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
RBBP4-208ENST00000463378 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
RBBP4-208ENST00000463378 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
RBBP4-208ENST00000463378 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
RBBP4-208ENST00000463378 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
RBBP4-208ENST00000463378 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
RBBP4-208ENST00000463378 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
RBBP4-208ENST00000463378 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
RBBP4-208ENST00000463378 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
RBBP4-208ENST00000463378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
RBBP4-208ENST00000463378 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
RBBP4-208ENST00000463378 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
RBBP4-208ENST00000463378 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
RBBP4-208ENST00000463378 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
RBBP4-208ENST00000463378 PYGBP11216 843 aa12.2□□□□□ -0.46
RBBP4-208ENST00000463378 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
RBBP4-208ENST00000463378 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
RBBP4-208ENST00000463378 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
RBBP4-208ENST00000463378 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
RBBP4-208ENST00000463378 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
RBBP4-208ENST00000463378 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
RBBP4-208ENST00000463378 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
RBBP4-208ENST00000463378 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
RBBP4-208ENST00000463378 GTF3C3Q9Y5Q9 886 aa12.01□□□□□ -0.49
RBBP4-208ENST00000463378 TMEM132AQ24JP5 1023 aa11.97□□□□□ -0.49
RBBP4-208ENST00000463378 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
RBBP4-208ENST00000463378 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
RBBP4-208ENST00000463378 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
RBBP4-208ENST00000463378 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
RBBP4-208ENST00000463378 PSEN1P49768 467 aa11.91□□□□□ -0.5
RBBP4-208ENST00000463378 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
RBBP4-208ENST00000463378 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
RBBP4-208ENST00000463378 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
RBBP4-208ENST00000463378 FARP1Q9Y4F1 1045 aaPredicted RBP11.91□□□□□ -0.5
RBBP4-208ENST00000463378 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
RBBP4-208ENST00000463378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
RBBP4-208ENST00000463378 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
RBBP4-208ENST00000463378 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
RBBP4-208ENST00000463378 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
RBBP4-208ENST00000463378 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
RBBP4-208ENST00000463378 NLRP6P59044 892 aa11.83□□□□□ -0.52
RBBP4-208ENST00000463378 E2F4Q16254 413 aa11.81□□□□□ -0.52
RBBP4-208ENST00000463378 SOX12O15370 315 aa11.8□□□□□ -0.52
RBBP4-208ENST00000463378 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
RBBP4-208ENST00000463378 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
RBBP4-208ENST00000463378 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
RBBP4-208ENST00000463378 PPP1R37O75864 691 aa11.74□□□□□ -0.53
RBBP4-208ENST00000463378 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
RBBP4-208ENST00000463378 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
RBBP4-208ENST00000463378 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
RBBP4-208ENST00000463378 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
RBBP4-208ENST00000463378 ZC3H15Q8WU90 426 aaKnown RBP11.72□□□□□ -0.53
RBBP4-208ENST00000463378 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
RBBP4-208ENST00000463378 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
RBBP4-208ENST00000463378 MAP3K13O43283 966 aa11.69□□□□□ -0.54
RBBP4-208ENST00000463378 PDE4AP27815 886 aa11.69□□□□□ -0.54
RBBP4-208ENST00000463378 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
RBBP4-208ENST00000463378 SEMA3EO15041 775 aa11.68□□□□□ -0.54
RBBP4-208ENST00000463378 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
RBBP4-208ENST00000463378 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
RBBP4-208ENST00000463378 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
RBBP4-208ENST00000463378 ARXQ96QS3 562 aa11.66□□□□□ -0.54
RBBP4-208ENST00000463378 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
RBBP4-208ENST00000463378 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
RBBP4-208ENST00000463378 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
RBBP4-208ENST00000463378 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
RBBP4-208ENST00000463378 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
RBBP4-208ENST00000463378 MFSD10Q14728 455 aa11.6□□□□□ -0.55
RBBP4-208ENST00000463378 ARIH1Q9Y4X5 557 aaPredicted RBP11.57□□□□□ -0.56
RBBP4-208ENST00000463378 ZMYND10O75800 440 aa11.56□□□□□ -0.56
RBBP4-208ENST00000463378 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
RBBP4-208ENST00000463378 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
RBBP4-208ENST00000463378 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
RBBP4-208ENST00000463378 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
RBBP4-208ENST00000463378 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
RBBP4-208ENST00000463378 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
RBBP4-208ENST00000463378 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
RBBP4-208ENST00000463378 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
RBBP4-208ENST00000463378 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
RBBP4-208ENST00000463378 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
RBBP4-208ENST00000463378 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
RBBP4-208ENST00000463378 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
RBBP4-208ENST00000463378 HOMEZQ8IX15 550 aa11.47□□□□□ -0.57
RBBP4-208ENST00000463378 PHF12Q96QT6 1004 aa11.47□□□□□ -0.57
RBBP4-208ENST00000463378 AK7Q96M32 723 aa11.46□□□□□ -0.57
RBBP4-208ENST00000463378 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
RBBP4-208ENST00000463378 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
RBBP4-208ENST00000463378 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
RBBP4-208ENST00000463378 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms