RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
COPS3-205ENST00000463097 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
COPS3-205ENST00000463097 NUBP1P53384 320 aa11.77□□□□□ -0.53
COPS3-205ENST00000463097 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
COPS3-205ENST00000463097 STK25O00506 426 aa11.7□□□□□ -0.54
COPS3-205ENST00000463097 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
COPS3-205ENST00000463097 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
COPS3-205ENST00000463097 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
COPS3-205ENST00000463097 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
COPS3-205ENST00000463097 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
COPS3-205ENST00000463097 CHRM1P11229 460 aaPredicted RBP11.63□□□□□ -0.55
COPS3-205ENST00000463097 SGIP1Q9BQI5 828 aa11.62□□□□□ -0.55
COPS3-205ENST00000463097 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
COPS3-205ENST00000463097 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
COPS3-205ENST00000463097 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
COPS3-205ENST00000463097 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
COPS3-205ENST00000463097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
COPS3-205ENST00000463097 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
COPS3-205ENST00000463097 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
COPS3-205ENST00000463097 ERICH6Q7L0X2 663 aa11.56□□□□□ -0.56
COPS3-205ENST00000463097 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
COPS3-205ENST00000463097 TMEM132AQ24JP5 1023 aa11.54□□□□□ -0.56
COPS3-205ENST00000463097 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
COPS3-205ENST00000463097 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
COPS3-205ENST00000463097 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
COPS3-205ENST00000463097 POTEDQ86YR6 584 aa11.48□□□□□ -0.57
COPS3-205ENST00000463097 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
COPS3-205ENST00000463097 PYGBP11216 843 aa11.47□□□□□ -0.57
COPS3-205ENST00000463097 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
COPS3-205ENST00000463097 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
COPS3-205ENST00000463097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
COPS3-205ENST00000463097 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
COPS3-205ENST00000463097 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
COPS3-205ENST00000463097 ARXQ96QS3 562 aa11.39□□□□□ -0.59
COPS3-205ENST00000463097 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
COPS3-205ENST00000463097 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
COPS3-205ENST00000463097 CACNB1Q02641 598 aaPredicted RBP11.36□□□□□ -0.59
COPS3-205ENST00000463097 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
COPS3-205ENST00000463097 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
COPS3-205ENST00000463097 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
COPS3-205ENST00000463097 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
COPS3-205ENST00000463097 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
COPS3-205ENST00000463097 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
COPS3-205ENST00000463097 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
COPS3-205ENST00000463097 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
COPS3-205ENST00000463097 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
COPS3-205ENST00000463097 PCDHB8Q9UN66 801 aa11.22□□□□□ -0.61
COPS3-205ENST00000463097 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
COPS3-205ENST00000463097 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
COPS3-205ENST00000463097 PSEN1P49768 467 aa11.19□□□□□ -0.62
COPS3-205ENST00000463097 E2F4Q16254 413 aa11.19□□□□□ -0.62
COPS3-205ENST00000463097 HOMEZQ8IX15 550 aa11.16□□□□□ -0.62
COPS3-205ENST00000463097 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
COPS3-205ENST00000463097 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
COPS3-205ENST00000463097 PPP1R37O75864 691 aa11.15□□□□□ -0.62
COPS3-205ENST00000463097 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
COPS3-205ENST00000463097 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
COPS3-205ENST00000463097 SEMA3EO15041 775 aa11.14□□□□□ -0.63
COPS3-205ENST00000463097 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
COPS3-205ENST00000463097 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
COPS3-205ENST00000463097 NLRP6P59044 892 aa11.11□□□□□ -0.63
COPS3-205ENST00000463097 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
COPS3-205ENST00000463097 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
COPS3-205ENST00000463097 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
COPS3-205ENST00000463097 SOX12O15370 315 aa11.08□□□□□ -0.64
COPS3-205ENST00000463097 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
COPS3-205ENST00000463097 ZMYND10O75800 440 aa11.06□□□□□ -0.64
COPS3-205ENST00000463097 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
COPS3-205ENST00000463097 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
COPS3-205ENST00000463097 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
COPS3-205ENST00000463097 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
COPS3-205ENST00000463097 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
COPS3-205ENST00000463097 PDE4AP27815 886 aa11.02□□□□□ -0.65
COPS3-205ENST00000463097 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
COPS3-205ENST00000463097 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
COPS3-205ENST00000463097 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
COPS3-205ENST00000463097 MFSD10Q14728 455 aa10.98□□□□□ -0.65
COPS3-205ENST00000463097 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
COPS3-205ENST00000463097 MAP3K13O43283 966 aa10.96□□□□□ -0.65
COPS3-205ENST00000463097 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
COPS3-205ENST00000463097 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
COPS3-205ENST00000463097 DDX27Q96GQ7 796 aaKnown RBP10.94□□□□□ -0.66
COPS3-205ENST00000463097 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
COPS3-205ENST00000463097 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
COPS3-205ENST00000463097 AK7Q96M32 723 aa10.92□□□□□ -0.66
COPS3-205ENST00000463097 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
COPS3-205ENST00000463097 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
COPS3-205ENST00000463097 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
COPS3-205ENST00000463097 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
COPS3-205ENST00000463097 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
COPS3-205ENST00000463097 GPBP1L1Q9HC44 474 aaPredicted RBP10.86□□□□□ -0.67
COPS3-205ENST00000463097 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
COPS3-205ENST00000463097 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
COPS3-205ENST00000463097 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
COPS3-205ENST00000463097 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
COPS3-205ENST00000463097 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
COPS3-205ENST00000463097 TRIM66O15016 1216 aa10.78□□□□□ -0.68
COPS3-205ENST00000463097 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
COPS3-205ENST00000463097 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
COPS3-205ENST00000463097 PDE4DQ08499 809 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms