RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
CD46-210ENST00000462968 METRNQ9UJH8 293 aa8.83□□□□□ -1
CD46-210ENST00000462968 C7P10643 843 aa8.82□□□□□ -1
CD46-210ENST00000462968 SLC39A7Q92504 469 aa8.82□□□□□ -1
CD46-210ENST00000462968 PCDH10Q9P2E7 1040 aa8.8□□□□□ -1
CD46-210ENST00000462968 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
CD46-210ENST00000462968 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
CD46-210ENST00000462968 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
CD46-210ENST00000462968 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
CD46-210ENST00000462968 PROM2Q8N271 834 aa8.71□□□□□ -1.02
CD46-210ENST00000462968 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
CD46-210ENST00000462968 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
CD46-210ENST00000462968 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
CD46-210ENST00000462968 SCUBE2Q9NQ36 999 aa8.69□□□□□ -1.02
CD46-210ENST00000462968 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
CD46-210ENST00000462968 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
CD46-210ENST00000462968 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
CD46-210ENST00000462968 TIE1P35590 1138 aa8.63□□□□□ -1.03
CD46-210ENST00000462968 MAP3K13O43283 966 aa8.61□□□□□ -1.03
CD46-210ENST00000462968 EHMT2Q96KQ7 1210 aa8.59□□□□□ -1.03
CD46-210ENST00000462968 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
CD46-210ENST00000462968 RASEFQ8IZ41 740 aa8.58□□□□□ -1.04
CD46-210ENST00000462968 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
CD46-210ENST00000462968 SEC24BO95487 1268 aa8.52□□□□□ -1.05
CD46-210ENST00000462968 IER5LQ5T953 404 aa8.52□□□□□ -1.05
CD46-210ENST00000462968 CDAN1Q8IWY9 1227 aa8.51□□□□□ -1.05
CD46-210ENST00000462968 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
CD46-210ENST00000462968 MIER1Q8N108 512 aa8.5□□□□□ -1.05
CD46-210ENST00000462968 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
CD46-210ENST00000462968 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
CD46-210ENST00000462968 PCDHB13Q9Y5F0 798 aa8.46□□□□□ -1.06
CD46-210ENST00000462968 ST18O60284 1047 aa8.45□□□□□ -1.06
CD46-210ENST00000462968 NUBP1P53384 320 aa8.44□□□□□ -1.06
CD46-210ENST00000462968 IFNL1Q8IU54 200 aa8.43□□□□□ -1.06
CD46-210ENST00000462968 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
CD46-210ENST00000462968 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
CD46-210ENST00000462968 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
CD46-210ENST00000462968 TMEM106CQ9BVX2 250 aa8.39□□□□□ -1.07
CD46-210ENST00000462968 PLCG2P16885 1265 aa8.38□□□□□ -1.07
CD46-210ENST00000462968 ZBTB47Q9UFB7 747 aaPredicted RBP8.37□□□□□ -1.07
CD46-210ENST00000462968 TMEM121BQ9BXQ6 578 aaPredicted RBP8.35□□□□□ -1.07
CD46-210ENST00000462968 MMRN1Q13201 1228 aa8.33□□□□□ -1.08
CD46-210ENST00000462968 FAM212AQ96EL1 285 aa8.33□□□□□ -1.08
CD46-210ENST00000462968 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
CD46-210ENST00000462968 OCEL1Q9H607 264 aa8.32□□□□□ -1.08
CD46-210ENST00000462968 SNPHO15079 494 aa8.28□□□□□ -1.08
CD46-210ENST00000462968 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.26□□□□□ -1.09
CD46-210ENST00000462968 MARVELD3Q96A59 401 aa8.25□□□□□ -1.09
CD46-210ENST00000462968 PYGBP11216 843 aa8.23□□□□□ -1.09
CD46-210ENST00000462968 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
CD46-210ENST00000462968 PCDHB8Q9UN66 801 aa8.22□□□□□ -1.09
CD46-210ENST00000462968 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
CD46-210ENST00000462968 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
CD46-210ENST00000462968 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
CD46-210ENST00000462968 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
CD46-210ENST00000462968 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
CD46-210ENST00000462968 EMP3P54852 163 aa8.15□□□□□ -1.1
CD46-210ENST00000462968 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
CD46-210ENST00000462968 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
CD46-210ENST00000462968 HS3ST6Q96QI5 342 aa8.13□□□□□ -1.11
CD46-210ENST00000462968 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
CD46-210ENST00000462968 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
CD46-210ENST00000462968 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
CD46-210ENST00000462968 FKBP8Q14318 412 aa8.1□□□□□ -1.11
CD46-210ENST00000462968 FAM205CA6NFA0 338 aa8.09□□□□□ -1.11
CD46-210ENST00000462968 CHRM1P11229 460 aaPredicted RBP8.09□□□□□ -1.11
CD46-210ENST00000462968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.09□□□□□ -1.112e-11■□□□□ 11.2
CD46-210ENST00000462968 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
CD46-210ENST00000462968 GSE1Q14687 1217 aa8.07□□□□□ -1.12
CD46-210ENST00000462968 PSEN1P49768 467 aa8.06□□□□□ -1.12
CD46-210ENST00000462968 HOXB3P14651 431 aaPredicted RBP8.05□□□□□ -1.12
CD46-210ENST00000462968 FBXO3Q9UK99 471 aa8.04□□□□□ -1.12
CD46-210ENST00000462968 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
CD46-210ENST00000462968 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
CD46-210ENST00000462968 PDAP1Q13442 181 aaKnown RBP8□□□□□ -1.13
CD46-210ENST00000462968 VASPP50552 380 aaPredicted RBP7.99□□□□□ -1.13
CD46-210ENST00000462968 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
CD46-210ENST00000462968 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
CD46-210ENST00000462968 CABP2Q9NPB3 220 aa7.95□□□□□ -1.14
CD46-210ENST00000462968 DOK7Q18PE1 504 aa7.93□□□□□ -1.14
CD46-210ENST00000462968 ZNF710Q8N1W2 664 aa7.93□□□□□ -1.14
CD46-210ENST00000462968 ERBB3P21860 1342 aa7.93□□□□□ -1.14
CD46-210ENST00000462968 G3V3G9 751 aa7.92□□□□□ -1.14
CD46-210ENST00000462968 RNF166Q96A37 237 aaPredicted RBP7.92□□□□□ -1.14
CD46-210ENST00000462968 VARS2Q5ST30 1063 aaKnown RBP7.89□□□□□ -1.15
CD46-210ENST00000462968 MYT1LQ9UL68 1186 aa7.87□□□□□ -1.15
CD46-210ENST00000462968 RIMBP2O15034 1052 aa7.86□□□□□ -1.15
CD46-210ENST00000462968 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
CD46-210ENST00000462968 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
CD46-210ENST00000462968 TMEM92Q6UXU6 159 aa7.85□□□□□ -1.15
CD46-210ENST00000462968 GPR153Q6NV75 609 aa7.84□□□□□ -1.15
CD46-210ENST00000462968 SPOCK2Q92563 424 aa7.84□□□□□ -1.15
CD46-210ENST00000462968 EFCAB3Q8N7B9 438 aa7.83□□□□□ -1.16
CD46-210ENST00000462968 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
CD46-210ENST00000462968 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
CD46-210ENST00000462968 MICALL2Q8IY33 904 aa7.82□□□□□ -1.16
CD46-210ENST00000462968 PTGER2P43116 358 aa7.81□□□□□ -1.16
CD46-210ENST00000462968 MS4A4AQ96JQ5 239 aa7.76□□□□□ -1.17
CD46-210ENST00000462968 TRIM41Q8WV44 630 aa7.75□□□□□ -1.17
CD46-210ENST00000462968 SOX12O15370 315 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms