RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
UBE4B-204ENST00000462658 PYGBP11216 843 aa15.91■□□□□ 0.14
UBE4B-204ENST00000462658 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
UBE4B-204ENST00000462658 CD44P16070 742 aaKnown RBP15.9■□□□□ 0.14
UBE4B-204ENST00000462658 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-204ENST00000462658 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
UBE4B-204ENST00000462658 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
UBE4B-204ENST00000462658 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
UBE4B-204ENST00000462658 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
UBE4B-204ENST00000462658 CHRM1P11229 460 aaPredicted RBP15.81■□□□□ 0.12
UBE4B-204ENST00000462658 HAX1O00165 279 aa15.78■□□□□ 0.12
UBE4B-204ENST00000462658 POTEHQ6S545 545 aa15.78■□□□□ 0.12
UBE4B-204ENST00000462658 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
UBE4B-204ENST00000462658 EVX2Q03828 476 aa15.73■□□□□ 0.11
UBE4B-204ENST00000462658 RIOK3O14730 519 aaKnown RBP15.72■□□□□ 0.11
UBE4B-204ENST00000462658 KIF12Q96FN5 646 aa15.7■□□□□ 0.1
UBE4B-204ENST00000462658 MAP3K13O43283 966 aa15.69■□□□□ 0.1
UBE4B-204ENST00000462658 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
UBE4B-204ENST00000462658 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
UBE4B-204ENST00000462658 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
UBE4B-204ENST00000462658 CHGAP10645 457 aaKnown RBP15.63■□□□□ 0.09
UBE4B-204ENST00000462658 ZNF467Q7Z7K2 595 aaPredicted RBP15.62■□□□□ 0.09
UBE4B-204ENST00000462658 IFNL1Q8IU54 200 aa15.62■□□□□ 0.09
UBE4B-204ENST00000462658 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
UBE4B-204ENST00000462658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.57■□□□□ 0.08
UBE4B-204ENST00000462658 ZFP91Q96JP5 570 aaPredicted RBP15.57■□□□□ 0.08
UBE4B-204ENST00000462658 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
UBE4B-204ENST00000462658 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
UBE4B-204ENST00000462658 MS4A3Q96HJ5 214 aa15.55■□□□□ 0.08
UBE4B-204ENST00000462658 STK25O00506 426 aa15.53■□□□□ 0.08
UBE4B-204ENST00000462658 HS6ST3Q8IZP7 471 aa15.52■□□□□ 0.08
UBE4B-204ENST00000462658 PDAP1Q13442 181 aaKnown RBP15.51■□□□□ 0.07
UBE4B-204ENST00000462658 PSEN1P49768 467 aa15.5■□□□□ 0.07
UBE4B-204ENST00000462658 BCL11BQ9C0K0 894 aaPredicted RBP15.49■□□□□ 0.07
UBE4B-204ENST00000462658 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
UBE4B-204ENST00000462658 STK24Q9Y6E0 443 aa15.48■□□□□ 0.07
UBE4B-204ENST00000462658 GALR2O43603 387 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-204ENST00000462658 BBXQ8WY36 941 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-204ENST00000462658 GABBR2O75899 941 aa15.37■□□□□ 0.05
UBE4B-204ENST00000462658 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-204ENST00000462658 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-204ENST00000462658 TMEM106CQ9BVX2 250 aa15.36■□□□□ 0.05
UBE4B-204ENST00000462658 CLCN6P51797 869 aa15.34■□□□□ 0.05
UBE4B-204ENST00000462658 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
UBE4B-204ENST00000462658 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
UBE4B-204ENST00000462658 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
UBE4B-204ENST00000462658 CABP2Q9NPB3 220 aa15.33■□□□□ 0.04
UBE4B-204ENST00000462658 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
UBE4B-204ENST00000462658 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
UBE4B-204ENST00000462658 TIE1P35590 1138 aa15.3■□□□□ 0.04
UBE4B-204ENST00000462658 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
UBE4B-204ENST00000462658 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
UBE4B-204ENST00000462658 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
UBE4B-204ENST00000462658 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
UBE4B-204ENST00000462658 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
UBE4B-204ENST00000462658 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
UBE4B-204ENST00000462658 ATN1P54259 1190 aaPredicted RBP15.2■□□□□ 0.02
UBE4B-204ENST00000462658 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
UBE4B-204ENST00000462658 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
UBE4B-204ENST00000462658 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
UBE4B-204ENST00000462658 MFRPQ9BY79 579 aa15.18■□□□□ 0.02
UBE4B-204ENST00000462658 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
UBE4B-204ENST00000462658 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
UBE4B-204ENST00000462658 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
UBE4B-204ENST00000462658 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
UBE4B-204ENST00000462658 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
UBE4B-204ENST00000462658 SOX12O15370 315 aa15.12■□□□□ 0.01
UBE4B-204ENST00000462658 FBXO22Q8NEZ5 403 aa15.1■□□□□ 0.01
UBE4B-204ENST00000462658 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
UBE4B-204ENST00000462658 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
UBE4B-204ENST00000462658 NLRP6P59044 892 aa15.08■□□□□ 0
UBE4B-204ENST00000462658 RYDENQ9NUL5 291 aaKnown RBP15.07■□□□□ 0
UBE4B-204ENST00000462658 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
UBE4B-204ENST00000462658 MS4A4AQ96JQ5 239 aa15.05■□□□□ -0
UBE4B-204ENST00000462658 PPP1R37O75864 691 aa15.03■□□□□ -0
UBE4B-204ENST00000462658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -07e-8■■■■■ 32.2
UBE4B-204ENST00000462658 IRX5P78411 483 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-204ENST00000462658 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
UBE4B-204ENST00000462658 IER5LQ5T953 404 aa14.96□□□□□ -0.01
UBE4B-204ENST00000462658 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
UBE4B-204ENST00000462658 PDCD7Q8N8D1 485 aaKnown RBP14.93□□□□□ -0.02
UBE4B-204ENST00000462658 SLC39A7Q92504 469 aa14.92□□□□□ -0.02
UBE4B-204ENST00000462658 OCEL1Q9H607 264 aa14.92□□□□□ -0.02
UBE4B-204ENST00000462658 COLQQ9Y215 455 aaPredicted RBP14.92□□□□□ -0.02
UBE4B-204ENST00000462658 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
UBE4B-204ENST00000462658 SEC24BO95487 1268 aa14.89□□□□□ -0.03
UBE4B-204ENST00000462658 PLCG2P16885 1265 aa14.89□□□□□ -0.03
UBE4B-204ENST00000462658 POTEFA5A3E0 1075 aa14.88□□□□□ -0.03
UBE4B-204ENST00000462658 C7P10643 843 aa14.87□□□□□ -0.03
UBE4B-204ENST00000462658 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
UBE4B-204ENST00000462658 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
UBE4B-204ENST00000462658 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
UBE4B-204ENST00000462658 MICALL2Q8IY33 904 aa14.76□□□□□ -0.05
UBE4B-204ENST00000462658 BOLA1Q9Y3E2 137 aa14.75□□□□□ -0.05
UBE4B-204ENST00000462658 G3V3G9 751 aa14.71□□□□□ -0.05
UBE4B-204ENST00000462658 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-204ENST00000462658 TMEM121BQ9BXQ6 578 aaPredicted RBP14.69□□□□□ -0.06
UBE4B-204ENST00000462658 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
UBE4B-204ENST00000462658 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
UBE4B-204ENST00000462658 CRISPLD2Q9H0B8 497 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms