RNA–Protein interactions for RNA: ENST00000462038.1

ITM2A-204, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 190 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-204ENST00000462038 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
ITM2A-204ENST00000462038 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
ITM2A-204ENST00000462038 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
ITM2A-204ENST00000462038 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
ITM2A-204ENST00000462038 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
ITM2A-204ENST00000462038 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
ITM2A-204ENST00000462038 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
ITM2A-204ENST00000462038 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
ITM2A-204ENST00000462038 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
ITM2A-204ENST00000462038 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
ITM2A-204ENST00000462038 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
ITM2A-204ENST00000462038 CLEC11AQ9Y240 323 aa10.63□□□□□ -0.71
ITM2A-204ENST00000462038 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
ITM2A-204ENST00000462038 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
ITM2A-204ENST00000462038 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
ITM2A-204ENST00000462038 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
ITM2A-204ENST00000462038 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
ITM2A-204ENST00000462038 STK25O00506 426 aa10.57□□□□□ -0.72
ITM2A-204ENST00000462038 NBR1Q14596 966 aa10.57□□□□□ -0.72
ITM2A-204ENST00000462038 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
ITM2A-204ENST00000462038 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
ITM2A-204ENST00000462038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
ITM2A-204ENST00000462038 ZFP91Q96JP5 570 aaPredicted RBP10.48□□□□□ -0.73
ITM2A-204ENST00000462038 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
ITM2A-204ENST00000462038 STK24Q9Y6E0 443 aa10.48□□□□□ -0.73
ITM2A-204ENST00000462038 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
ITM2A-204ENST00000462038 PYGBP11216 843 aa10.45□□□□□ -0.74
ITM2A-204ENST00000462038 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
ITM2A-204ENST00000462038 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
ITM2A-204ENST00000462038 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
ITM2A-204ENST00000462038 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
ITM2A-204ENST00000462038 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
ITM2A-204ENST00000462038 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
ITM2A-204ENST00000462038 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
ITM2A-204ENST00000462038 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
ITM2A-204ENST00000462038 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
ITM2A-204ENST00000462038 PCDHB8Q9UN66 801 aa10.24□□□□□ -0.77
ITM2A-204ENST00000462038 PCDHB13Q9Y5F0 798 aa10.24□□□□□ -0.77
ITM2A-204ENST00000462038 PSEN1P49768 467 aa10.23□□□□□ -0.77
ITM2A-204ENST00000462038 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
ITM2A-204ENST00000462038 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
ITM2A-204ENST00000462038 MFRPQ9BY79 579 aa10.2□□□□□ -0.78
ITM2A-204ENST00000462038 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
ITM2A-204ENST00000462038 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
ITM2A-204ENST00000462038 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
ITM2A-204ENST00000462038 SOX12O15370 315 aa10.15□□□□□ -0.78
ITM2A-204ENST00000462038 NLRP6P59044 892 aa10.14□□□□□ -0.79
ITM2A-204ENST00000462038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
ITM2A-204ENST00000462038 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
ITM2A-204ENST00000462038 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
ITM2A-204ENST00000462038 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
ITM2A-204ENST00000462038 KIF12Q96FN5 646 aa10.12□□□□□ -0.79
ITM2A-204ENST00000462038 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
ITM2A-204ENST00000462038 MAP3K13O43283 966 aa10.1□□□□□ -0.79
ITM2A-204ENST00000462038 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
ITM2A-204ENST00000462038 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
ITM2A-204ENST00000462038 PPP1R37O75864 691 aa10.08□□□□□ -0.8
ITM2A-204ENST00000462038 CABP2Q9NPB3 220 aa10.08□□□□□ -0.8
ITM2A-204ENST00000462038 E2F4Q16254 413 aa10.07□□□□□ -0.8
ITM2A-204ENST00000462038 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
ITM2A-204ENST00000462038 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
ITM2A-204ENST00000462038 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
ITM2A-204ENST00000462038 ERICH6Q7L0X2 663 aa10.04□□□□□ -0.8
ITM2A-204ENST00000462038 PDE4AP27815 886 aa10.01□□□□□ -0.81
ITM2A-204ENST00000462038 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
ITM2A-204ENST00000462038 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
ITM2A-204ENST00000462038 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
ITM2A-204ENST00000462038 MFSD10Q14728 455 aa9.97□□□□□ -0.81
ITM2A-204ENST00000462038 ZRANB1Q9UGI0 708 aa9.97□□□□□ -0.81
ITM2A-204ENST00000462038 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
ITM2A-204ENST00000462038 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
ITM2A-204ENST00000462038 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
ITM2A-204ENST00000462038 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
ITM2A-204ENST00000462038 MS4A4AQ96JQ5 239 aa9.95□□□□□ -0.82
ITM2A-204ENST00000462038 LARP6Q9BRS8 491 aaKnown RBP9.95□□□□□ -0.82
ITM2A-204ENST00000462038 SEMA3EO15041 775 aa9.94□□□□□ -0.82
ITM2A-204ENST00000462038 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
ITM2A-204ENST00000462038 CRISPLD2Q9H0B8 497 aa9.94□□□□□ -0.82
ITM2A-204ENST00000462038 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
ITM2A-204ENST00000462038 TIMELESSQ9UNS1 1208 aa9.93□□□□□ -0.82
ITM2A-204ENST00000462038 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
ITM2A-204ENST00000462038 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
ITM2A-204ENST00000462038 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
ITM2A-204ENST00000462038 TMEM106CQ9BVX2 250 aa9.9□□□□□ -0.82
ITM2A-204ENST00000462038 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
ITM2A-204ENST00000462038 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
ITM2A-204ENST00000462038 ZMYND10O75800 440 aa9.85□□□□□ -0.83
ITM2A-204ENST00000462038 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
ITM2A-204ENST00000462038 TIE1P35590 1138 aa9.83□□□□□ -0.84
ITM2A-204ENST00000462038 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
ITM2A-204ENST00000462038 SLC24A3Q9HC58 644 aa9.83□□□□□ -0.84
ITM2A-204ENST00000462038 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
ITM2A-204ENST00000462038 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
ITM2A-204ENST00000462038 TRPC6Q9Y210 931 aa9.8□□□□□ -0.84
ITM2A-204ENST00000462038 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
ITM2A-204ENST00000462038 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
ITM2A-204ENST00000462038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
ITM2A-204ENST00000462038 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
ITM2A-204ENST00000462038 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
ITM2A-204ENST00000462038 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms