RNA–Protein interactions for RNA: ENST00000461538.1

SYCP2-206, Transcript of synaptonemal complex protein 2, humanhuman

TSL 2

Gene SYCP2, Length 729 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2-206ENST00000461538 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
SYCP2-206ENST00000461538 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
SYCP2-206ENST00000461538 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
SYCP2-206ENST00000461538 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
SYCP2-206ENST00000461538 POTEMA6NI47 508 aa13.16□□□□□ -0.3
SYCP2-206ENST00000461538 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
SYCP2-206ENST00000461538 C7P10643 843 aa13.15□□□□□ -0.3
SYCP2-206ENST00000461538 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
SYCP2-206ENST00000461538 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
SYCP2-206ENST00000461538 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
SYCP2-206ENST00000461538 TRPC6Q9Y210 931 aa13.08□□□□□ -0.32
SYCP2-206ENST00000461538 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
SYCP2-206ENST00000461538 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
SYCP2-206ENST00000461538 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
SYCP2-206ENST00000461538 LCE2DQ5TA82 110 aaPredicted RBP13.02□□□□□ -0.33
SYCP2-206ENST00000461538 MAP3K13O43283 966 aa13.01□□□□□ -0.33
SYCP2-206ENST00000461538 MAMSTRQ6ZN01 415 aa13.01□□□□□ -0.33
SYCP2-206ENST00000461538 MIER1Q8N108 512 aa12.98□□□□□ -0.33
SYCP2-206ENST00000461538 TIE1P35590 1138 aa12.95□□□□□ -0.34
SYCP2-206ENST00000461538 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
SYCP2-206ENST00000461538 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
SYCP2-206ENST00000461538 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
SYCP2-206ENST00000461538 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
SYCP2-206ENST00000461538 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
SYCP2-206ENST00000461538 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
SYCP2-206ENST00000461538 NUBP1P53384 320 aa12.83□□□□□ -0.36
SYCP2-206ENST00000461538 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
SYCP2-206ENST00000461538 SEC24BO95487 1268 aa12.81□□□□□ -0.36
SYCP2-206ENST00000461538 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
SYCP2-206ENST00000461538 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
SYCP2-206ENST00000461538 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
SYCP2-206ENST00000461538 IER5LQ5T953 404 aa12.76□□□□□ -0.37
SYCP2-206ENST00000461538 IFNL1Q8IU54 200 aa12.76□□□□□ -0.37
SYCP2-206ENST00000461538 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
SYCP2-206ENST00000461538 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
SYCP2-206ENST00000461538 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
SYCP2-206ENST00000461538 SLAIN1Q8ND83 568 aa12.65□□□□□ -0.38
SYCP2-206ENST00000461538 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
SYCP2-206ENST00000461538 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SYCP2-206ENST00000461538 ST18O60284 1047 aa12.61□□□□□ -0.39
SYCP2-206ENST00000461538 PLCG2P16885 1265 aa12.61□□□□□ -0.39
SYCP2-206ENST00000461538 FKBP8Q14318 412 aa12.6□□□□□ -0.39
SYCP2-206ENST00000461538 PYGBP11216 843 aa12.56□□□□□ -0.4
SYCP2-206ENST00000461538 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
SYCP2-206ENST00000461538 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
SYCP2-206ENST00000461538 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
SYCP2-206ENST00000461538 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
SYCP2-206ENST00000461538 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
SYCP2-206ENST00000461538 TMEM121BQ9BXQ6 578 aaPredicted RBP12.39□□□□□ -0.43
SYCP2-206ENST00000461538 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
SYCP2-206ENST00000461538 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
SYCP2-206ENST00000461538 SNPHO15079 494 aa12.35□□□□□ -0.43
SYCP2-206ENST00000461538 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
SYCP2-206ENST00000461538 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
SYCP2-206ENST00000461538 ZNF467Q7Z7K2 595 aaPredicted RBP12.32□□□□□ -0.44
SYCP2-206ENST00000461538 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
SYCP2-206ENST00000461538 GSE1Q14687 1217 aa12.3□□□□□ -0.44
SYCP2-206ENST00000461538 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
SYCP2-206ENST00000461538 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
SYCP2-206ENST00000461538 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
SYCP2-206ENST00000461538 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
SYCP2-206ENST00000461538 PSEN1P49768 467 aa12.26□□□□□ -0.45
SYCP2-206ENST00000461538 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
SYCP2-206ENST00000461538 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
SYCP2-206ENST00000461538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYCP2-206ENST00000461538 POTEB3A0JP26 581 aa12.24□□□□□ -0.45
SYCP2-206ENST00000461538 POTEBQ6S5H4 581 aa12.24□□□□□ -0.45
SYCP2-206ENST00000461538 EMP3P54852 163 aa12.22□□□□□ -0.45
SYCP2-206ENST00000461538 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
SYCP2-206ENST00000461538 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
SYCP2-206ENST00000461538 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
SYCP2-206ENST00000461538 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
SYCP2-206ENST00000461538 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
SYCP2-206ENST00000461538 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
SYCP2-206ENST00000461538 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
SYCP2-206ENST00000461538 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
SYCP2-206ENST00000461538 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
SYCP2-206ENST00000461538 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
SYCP2-206ENST00000461538 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
SYCP2-206ENST00000461538 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
SYCP2-206ENST00000461538 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
SYCP2-206ENST00000461538 G3V3G9 751 aa12□□□□□ -0.49
SYCP2-206ENST00000461538 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
SYCP2-206ENST00000461538 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
SYCP2-206ENST00000461538 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
SYCP2-206ENST00000461538 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
SYCP2-206ENST00000461538 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
SYCP2-206ENST00000461538 ERBB3P21860 1342 aa11.91□□□□□ -0.5
SYCP2-206ENST00000461538 MICALL2Q8IY33 904 aa11.87□□□□□ -0.51
SYCP2-206ENST00000461538 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
SYCP2-206ENST00000461538 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
SYCP2-206ENST00000461538 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
SYCP2-206ENST00000461538 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
SYCP2-206ENST00000461538 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
SYCP2-206ENST00000461538 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
SYCP2-206ENST00000461538 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
SYCP2-206ENST00000461538 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
SYCP2-206ENST00000461538 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.53
SYCP2-206ENST00000461538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
SYCP2-206ENST00000461538 SOX12O15370 315 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms