RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
COL21A1-205ENST00000461489 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
COL21A1-205ENST00000461489 LHX8Q68G74 356 aa13.33□□□□□ -0.28
COL21A1-205ENST00000461489 NUBP1P53384 320 aa13.3□□□□□ -0.28
COL21A1-205ENST00000461489 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
COL21A1-205ENST00000461489 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-205ENST00000461489 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
COL21A1-205ENST00000461489 MAP3K13O43283 966 aa13.23□□□□□ -0.29
COL21A1-205ENST00000461489 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
COL21A1-205ENST00000461489 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-205ENST00000461489 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
COL21A1-205ENST00000461489 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
COL21A1-205ENST00000461489 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
COL21A1-205ENST00000461489 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
COL21A1-205ENST00000461489 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
COL21A1-205ENST00000461489 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
COL21A1-205ENST00000461489 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
COL21A1-205ENST00000461489 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
COL21A1-205ENST00000461489 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
COL21A1-205ENST00000461489 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
COL21A1-205ENST00000461489 TIE1P35590 1138 aa13.09□□□□□ -0.31
COL21A1-205ENST00000461489 C7P10643 843 aa13.08□□□□□ -0.32
COL21A1-205ENST00000461489 PYGBP11216 843 aa13.06□□□□□ -0.32
COL21A1-205ENST00000461489 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
COL21A1-205ENST00000461489 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
COL21A1-205ENST00000461489 GSE1Q14687 1217 aa13.03□□□□□ -0.32
COL21A1-205ENST00000461489 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
COL21A1-205ENST00000461489 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
COL21A1-205ENST00000461489 SPOCK2Q92563 424 aa13□□□□□ -0.33
COL21A1-205ENST00000461489 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
COL21A1-205ENST00000461489 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
COL21A1-205ENST00000461489 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
COL21A1-205ENST00000461489 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
COL21A1-205ENST00000461489 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
COL21A1-205ENST00000461489 SEC24BO95487 1268 aa12.91□□□□□ -0.34
COL21A1-205ENST00000461489 IER5LQ5T953 404 aa12.89□□□□□ -0.35
COL21A1-205ENST00000461489 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
COL21A1-205ENST00000461489 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
COL21A1-205ENST00000461489 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
COL21A1-205ENST00000461489 ZNF467Q7Z7K2 595 aaPredicted RBP12.87□□□□□ -0.35
COL21A1-205ENST00000461489 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
COL21A1-205ENST00000461489 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-205ENST00000461489 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
COL21A1-205ENST00000461489 PLCG2P16885 1265 aa12.78□□□□□ -0.36
COL21A1-205ENST00000461489 PSEN1P49768 467 aa12.75□□□□□ -0.37
COL21A1-205ENST00000461489 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
COL21A1-205ENST00000461489 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
COL21A1-205ENST00000461489 PDAP1Q13442 181 aaKnown RBP12.72□□□□□ -0.37
COL21A1-205ENST00000461489 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
COL21A1-205ENST00000461489 OCEL1Q9H607 264 aa12.71□□□□□ -0.37
COL21A1-205ENST00000461489 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
COL21A1-205ENST00000461489 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
COL21A1-205ENST00000461489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL21A1-205ENST00000461489 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
COL21A1-205ENST00000461489 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
COL21A1-205ENST00000461489 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-205ENST00000461489 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
COL21A1-205ENST00000461489 POTEMA6NI47 508 aa12.54□□□□□ -0.4
COL21A1-205ENST00000461489 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
COL21A1-205ENST00000461489 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
COL21A1-205ENST00000461489 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
COL21A1-205ENST00000461489 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
COL21A1-205ENST00000461489 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
COL21A1-205ENST00000461489 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
COL21A1-205ENST00000461489 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
COL21A1-205ENST00000461489 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
COL21A1-205ENST00000461489 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
COL21A1-205ENST00000461489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
COL21A1-205ENST00000461489 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
COL21A1-205ENST00000461489 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
COL21A1-205ENST00000461489 G3V3G9 751 aa12.44□□□□□ -0.42
COL21A1-205ENST00000461489 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
COL21A1-205ENST00000461489 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
COL21A1-205ENST00000461489 BOLA1Q9Y3E2 137 aa12.39□□□□□ -0.43
COL21A1-205ENST00000461489 SNPHO15079 494 aa12.38□□□□□ -0.43
COL21A1-205ENST00000461489 ST18O60284 1047 aa12.36□□□□□ -0.43
COL21A1-205ENST00000461489 PKD2Q13563 968 aa12.36□□□□□ -0.43
COL21A1-205ENST00000461489 SOX12O15370 315 aa12.35□□□□□ -0.43
COL21A1-205ENST00000461489 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
COL21A1-205ENST00000461489 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
COL21A1-205ENST00000461489 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
COL21A1-205ENST00000461489 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
COL21A1-205ENST00000461489 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
COL21A1-205ENST00000461489 STK25O00506 426 aa12.3□□□□□ -0.44
COL21A1-205ENST00000461489 RGL2O15211 777 aa12.3□□□□□ -0.44
COL21A1-205ENST00000461489 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
COL21A1-205ENST00000461489 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
COL21A1-205ENST00000461489 NLRP6P59044 892 aa12.25□□□□□ -0.45
COL21A1-205ENST00000461489 MICALL2Q8IY33 904 aa12.25□□□□□ -0.45
COL21A1-205ENST00000461489 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
COL21A1-205ENST00000461489 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
COL21A1-205ENST00000461489 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
COL21A1-205ENST00000461489 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
COL21A1-205ENST00000461489 EMP3P54852 163 aa12.14□□□□□ -0.47
COL21A1-205ENST00000461489 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
COL21A1-205ENST00000461489 TMEM92Q6UXU6 159 aa12.13□□□□□ -0.47
COL21A1-205ENST00000461489 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
COL21A1-205ENST00000461489 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
COL21A1-205ENST00000461489 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
COL21A1-205ENST00000461489 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms