RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 MS4A3Q96HJ5 214 aa7.83□□□□□ -1.16
VCL-203ENST00000461383 ASTLQ6HA08 431 aaPredicted RBP7.82□□□□□ -1.16
VCL-203ENST00000461383 MIER1Q8N108 512 aa7.81□□□□□ -1.16
VCL-203ENST00000461383 KIF12Q96FN5 646 aa7.79□□□□□ -1.16
VCL-203ENST00000461383 TSPYL2Q9H2G4 693 aaPredicted RBP7.79□□□□□ -1.16
VCL-203ENST00000461383 ZBTB47Q9UFB7 747 aaPredicted RBP7.79□□□□□ -1.16
VCL-203ENST00000461383 RASEFQ8IZ41 740 aa7.78□□□□□ -1.16
VCL-203ENST00000461383 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
VCL-203ENST00000461383 PELP1Q8IZL8 1130 aaKnown RBP7.76□□□□□ -1.17
VCL-203ENST00000461383 PLCD3Q8N3E9 789 aa7.76□□□□□ -1.17
VCL-203ENST00000461383 NUBP1P53384 320 aa7.75□□□□□ -1.17
VCL-203ENST00000461383 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
VCL-203ENST00000461383 POTEB2H3BUK9 544 aa7.73□□□□□ -1.17
VCL-203ENST00000461383 SLC39A7Q92504 469 aa7.73□□□□□ -1.17
VCL-203ENST00000461383 C7P10643 843 aa7.72□□□□□ -1.17
VCL-203ENST00000461383 TIE1P35590 1138 aa7.72□□□□□ -1.17
VCL-203ENST00000461383 MAP3K13O43283 966 aa7.71□□□□□ -1.18
VCL-203ENST00000461383 METRNQ9UJH8 293 aa7.71□□□□□ -1.18
VCL-203ENST00000461383 VASPP50552 380 aaPredicted RBP7.7□□□□□ -1.18
VCL-203ENST00000461383 OTUD5Q96G74 571 aa7.7□□□□□ -1.18
VCL-203ENST00000461383 ATN1P54259 1190 aaPredicted RBP7.69□□□□□ -1.18
VCL-203ENST00000461383 BMP2KQ9NSY1 1161 aaPredicted RBP7.69□□□□□ -1.18
VCL-203ENST00000461383 FAM212AQ96EL1 285 aa7.67□□□□□ -1.18
VCL-203ENST00000461383 TRPC6Q9Y210 931 aa7.67□□□□□ -1.18
VCL-203ENST00000461383 TTLL13PA6NNM8 815 aa7.64□□□□□ -1.19
VCL-203ENST00000461383 POTEFA5A3E0 1075 aa7.63□□□□□ -1.19
VCL-203ENST00000461383 POTEJP0CG39 1038 aa7.63□□□□□ -1.19
VCL-203ENST00000461383 PCDHB13Q9Y5F0 798 aa7.63□□□□□ -1.19
VCL-203ENST00000461383 IER5LQ5T953 404 aa7.62□□□□□ -1.19
VCL-203ENST00000461383 MAMSTRQ6ZN01 415 aa7.62□□□□□ -1.19
VCL-203ENST00000461383 IFNL1Q8IU54 200 aa7.6□□□□□ -1.19
VCL-203ENST00000461383 DCAF8L2P0C7V8 631 aa7.59□□□□□ -1.19
VCL-203ENST00000461383 IFNLR1Q8IU57 520 aaPredicted RBP7.59□□□□□ -1.19
VCL-203ENST00000461383 KLHL34Q8N239 644 aa7.57□□□□□ -1.2
VCL-203ENST00000461383 TRIM35Q9UPQ4 493 aa7.57□□□□□ -1.2
VCL-203ENST00000461383 SCUBE2Q9NQ36 999 aa7.55□□□□□ -1.2
VCL-203ENST00000461383 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
VCL-203ENST00000461383 COLQQ9Y215 455 aaPredicted RBP7.54□□□□□ -1.2
VCL-203ENST00000461383 GSE1Q14687 1217 aa7.53□□□□□ -1.2
VCL-203ENST00000461383 TMEM106CQ9BVX2 250 aa7.53□□□□□ -1.2
VCL-203ENST00000461383 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
VCL-203ENST00000461383 PYGBP11216 843 aa7.51□□□□□ -1.21
VCL-203ENST00000461383 SEC24BO95487 1268 aa7.5□□□□□ -1.21
VCL-203ENST00000461383 IRX5P78411 483 aaPredicted RBP7.5□□□□□ -1.21
VCL-203ENST00000461383 SPOCK2Q92563 424 aa7.49□□□□□ -1.21
VCL-203ENST00000461383 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
VCL-203ENST00000461383 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
VCL-203ENST00000461383 POTEMA6NI47 508 aa7.47□□□□□ -1.21
VCL-203ENST00000461383 PCDHB8Q9UN66 801 aa7.46□□□□□ -1.22
VCL-203ENST00000461383 PLCG2P16885 1265 aa7.45□□□□□ -1.22
VCL-203ENST00000461383 PKD2Q13563 968 aa7.45□□□□□ -1.22
VCL-203ENST00000461383 POTEGQ6S5H5 508 aa7.45□□□□□ -1.22
VCL-203ENST00000461383 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
VCL-203ENST00000461383 ECM2O94769 699 aaPredicted RBP7.43□□□□□ -1.22
VCL-203ENST00000461383 PLCB2Q00722 1185 aa7.43□□□□□ -1.22
VCL-203ENST00000461383 OCEL1Q9H607 264 aa7.43□□□□□ -1.22
VCL-203ENST00000461383 PCDH10Q9P2E7 1040 aa7.43□□□□□ -1.22
VCL-203ENST00000461383 HAP1P54257 671 aaPredicted RBP7.4□□□□□ -1.22
VCL-203ENST00000461383 ILDR1Q86SU0 546 aaPredicted RBP7.4□□□□□ -1.22
VCL-203ENST00000461383 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
VCL-203ENST00000461383 PSEN1P49768 467 aa7.38□□□□□ -1.23
VCL-203ENST00000461383 PDAP1Q13442 181 aaKnown RBP7.38□□□□□ -1.23
VCL-203ENST00000461383 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
VCL-203ENST00000461383 SLAIN1Q8ND83 568 aa7.36□□□□□ -1.23
VCL-203ENST00000461383 CIZ1Q9ULV3 898 aaPredicted RBP7.36□□□□□ -1.23
VCL-203ENST00000461383 FAM163AQ96GL9 167 aaPredicted RBP7.35□□□□□ -1.23
VCL-203ENST00000461383 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.35□□□□□ -1.23
VCL-203ENST00000461383 MKRN3Q13064 507 aaKnown RBP7.34□□□□□ -1.23
VCL-203ENST00000461383 GOLGA2Q08379 1002 aa7.33□□□□□ -1.24
VCL-203ENST00000461383 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.32□□□□□ -1.24
VCL-203ENST00000461383 L3MBTL3Q96JM7 780 aaPredicted RBP7.31□□□□□ -1.24
VCL-203ENST00000461383 BBXQ8WY36 941 aaPredicted RBP7.3□□□□□ -1.24
VCL-203ENST00000461383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.3□□□□□ -1.24
VCL-203ENST00000461383 RGL2O15211 777 aa7.29□□□□□ -1.24
VCL-203ENST00000461383 ST18O60284 1047 aa7.29□□□□□ -1.24
VCL-203ENST00000461383 TMEM121BQ9BXQ6 578 aaPredicted RBP7.29□□□□□ -1.24
VCL-203ENST00000461383 SNPHO15079 494 aa7.28□□□□□ -1.24
VCL-203ENST00000461383 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
VCL-203ENST00000461383 CABP2Q9NPB3 220 aa7.27□□□□□ -1.25
VCL-203ENST00000461383 C3orf67Q6ZVT6 689 aa7.26□□□□□ -1.25
VCL-203ENST00000461383 PAXIP1Q6ZW49 1069 aaPredicted RBP7.26□□□□□ -1.25
VCL-203ENST00000461383 CHGAP10645 457 aaKnown RBP7.23□□□□□ -1.25
VCL-203ENST00000461383 VSIG10Q8N0Z9 540 aa7.23□□□□□ -1.25
VCL-203ENST00000461383 RNF25Q96BH1 459 aaPredicted RBP7.23□□□□□ -1.25
VCL-203ENST00000461383 RIOK3O14730 519 aaKnown RBP7.22□□□□□ -1.25
VCL-203ENST00000461383 DPY19L2Q6NUT2 758 aa7.22□□□□□ -1.25
VCL-203ENST00000461383 CDAN1Q8IWY9 1227 aa7.22□□□□□ -1.25
VCL-203ENST00000461383 SPRYD3Q8NCJ5 442 aa7.21□□□□□ -1.26
VCL-203ENST00000461383 BOLA1Q9Y3E2 137 aa7.21□□□□□ -1.26
VCL-203ENST00000461383 VGFO15240 615 aaPredicted RBP7.2□□□□□ -1.26
VCL-203ENST00000461383 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
VCL-203ENST00000461383 SOX12O15370 315 aa7.18□□□□□ -1.26
VCL-203ENST00000461383 BCANQ96GW7 911 aa7.18□□□□□ -1.26
VCL-203ENST00000461383 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
VCL-203ENST00000461383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.17□□□□□ -1.26
VCL-203ENST00000461383 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
VCL-203ENST00000461383 G3V3G9 751 aa7.16□□□□□ -1.26
VCL-203ENST00000461383 HOXB3P14651 431 aaPredicted RBP7.15□□□□□ -1.26
VCL-203ENST00000461383 MS4A4AQ96JQ5 239 aa7.14□□□□□ -1.27
VCL-203ENST00000461383 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms