RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
CCT4-202ENST00000461370 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
CCT4-202ENST00000461370 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
CCT4-202ENST00000461370 GSE1Q14687 1217 aa11.68□□□□□ -0.54
CCT4-202ENST00000461370 CLCN6P51797 869 aa11.67□□□□□ -0.54
CCT4-202ENST00000461370 GABBR2O75899 941 aa11.64□□□□□ -0.55
CCT4-202ENST00000461370 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
CCT4-202ENST00000461370 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
CCT4-202ENST00000461370 PYGBP11216 843 aa11.57□□□□□ -0.56
CCT4-202ENST00000461370 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
CCT4-202ENST00000461370 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
CCT4-202ENST00000461370 MAP3K13O43283 966 aa11.55□□□□□ -0.56
CCT4-202ENST00000461370 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
CCT4-202ENST00000461370 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
CCT4-202ENST00000461370 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
CCT4-202ENST00000461370 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
CCT4-202ENST00000461370 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
CCT4-202ENST00000461370 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
CCT4-202ENST00000461370 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
CCT4-202ENST00000461370 PKD2Q13563 968 aa11.43□□□□□ -0.58
CCT4-202ENST00000461370 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
CCT4-202ENST00000461370 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
CCT4-202ENST00000461370 TIE1P35590 1138 aa11.4□□□□□ -0.58
CCT4-202ENST00000461370 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
CCT4-202ENST00000461370 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
CCT4-202ENST00000461370 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
CCT4-202ENST00000461370 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
CCT4-202ENST00000461370 RNF25Q96BH1 459 aaPredicted RBP11.35□□□□□ -0.59
CCT4-202ENST00000461370 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
CCT4-202ENST00000461370 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
CCT4-202ENST00000461370 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
CCT4-202ENST00000461370 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
CCT4-202ENST00000461370 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
CCT4-202ENST00000461370 PSEN1P49768 467 aa11.31□□□□□ -0.6
CCT4-202ENST00000461370 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
CCT4-202ENST00000461370 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
CCT4-202ENST00000461370 RGL2O15211 777 aa11.29□□□□□ -0.6
CCT4-202ENST00000461370 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
CCT4-202ENST00000461370 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
CCT4-202ENST00000461370 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
CCT4-202ENST00000461370 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
CCT4-202ENST00000461370 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
CCT4-202ENST00000461370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
CCT4-202ENST00000461370 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
CCT4-202ENST00000461370 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
CCT4-202ENST00000461370 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
CCT4-202ENST00000461370 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
CCT4-202ENST00000461370 C7P10643 843 aa11.2□□□□□ -0.62
CCT4-202ENST00000461370 IER5LQ5T953 404 aa11.19□□□□□ -0.62
CCT4-202ENST00000461370 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
CCT4-202ENST00000461370 STK25O00506 426 aa11.16□□□□□ -0.62
CCT4-202ENST00000461370 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
CCT4-202ENST00000461370 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
CCT4-202ENST00000461370 SEC24BO95487 1268 aa11.13□□□□□ -0.63
CCT4-202ENST00000461370 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
CCT4-202ENST00000461370 DCAF8L2P0C7V8 631 aa11.11□□□□□ -0.63
CCT4-202ENST00000461370 PLCG2P16885 1265 aa11.1□□□□□ -0.63
CCT4-202ENST00000461370 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
CCT4-202ENST00000461370 HS6ST3Q8IZP7 471 aa11.08□□□□□ -0.64
CCT4-202ENST00000461370 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
CCT4-202ENST00000461370 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
CCT4-202ENST00000461370 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
CCT4-202ENST00000461370 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
CCT4-202ENST00000461370 OCEL1Q9H607 264 aa11.07□□□□□ -0.64
CCT4-202ENST00000461370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCT4-202ENST00000461370 LHX8Q68G74 356 aa11.05□□□□□ -0.64
CCT4-202ENST00000461370 SOX12O15370 315 aa11.02□□□□□ -0.65
CCT4-202ENST00000461370 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
CCT4-202ENST00000461370 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
CCT4-202ENST00000461370 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
CCT4-202ENST00000461370 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
CCT4-202ENST00000461370 NLRP6P59044 892 aa10.96□□□□□ -0.65
CCT4-202ENST00000461370 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
CCT4-202ENST00000461370 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
CCT4-202ENST00000461370 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
CCT4-202ENST00000461370 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
CCT4-202ENST00000461370 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
CCT4-202ENST00000461370 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
CCT4-202ENST00000461370 SCUBE2Q9NQ36 999 aa10.93□□□□□ -0.66
CCT4-202ENST00000461370 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
CCT4-202ENST00000461370 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
CCT4-202ENST00000461370 G3V3G9 751 aa10.9□□□□□ -0.66
CCT4-202ENST00000461370 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
CCT4-202ENST00000461370 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
CCT4-202ENST00000461370 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
CCT4-202ENST00000461370 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
CCT4-202ENST00000461370 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
CCT4-202ENST00000461370 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
CCT4-202ENST00000461370 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
CCT4-202ENST00000461370 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
CCT4-202ENST00000461370 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
CCT4-202ENST00000461370 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
CCT4-202ENST00000461370 PPP1R37O75864 691 aa10.77□□□□□ -0.69
CCT4-202ENST00000461370 SLAIN1Q8ND83 568 aa10.77□□□□□ -0.69
CCT4-202ENST00000461370 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
CCT4-202ENST00000461370 SPRYD3Q8NCJ5 442 aa10.69□□□□□ -0.7
CCT4-202ENST00000461370 TMEM92Q6UXU6 159 aa10.66□□□□□ -0.7
CCT4-202ENST00000461370 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
CCT4-202ENST00000461370 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
CCT4-202ENST00000461370 TMC2Q8TDI7 906 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms