RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
CHL1-209ENST00000461289 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
CHL1-209ENST00000461289 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
CHL1-209ENST00000461289 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
CHL1-209ENST00000461289 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
CHL1-209ENST00000461289 BBXQ8WY36 941 aaPredicted RBP15.32■□□□□ 0.04
CHL1-209ENST00000461289 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
CHL1-209ENST00000461289 HAX1O00165 279 aa15.3■□□□□ 0.04
CHL1-209ENST00000461289 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHL1-209ENST00000461289 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
CHL1-209ENST00000461289 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.04
CHL1-209ENST00000461289 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
CHL1-209ENST00000461289 PYGBP11216 843 aa15.24■□□□□ 0.03
CHL1-209ENST00000461289 RNF25Q96BH1 459 aaPredicted RBP15.23■□□□□ 0.03
CHL1-209ENST00000461289 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
CHL1-209ENST00000461289 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
CHL1-209ENST00000461289 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
CHL1-209ENST00000461289 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
CHL1-209ENST00000461289 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
CHL1-209ENST00000461289 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
CHL1-209ENST00000461289 STK25O00506 426 aa15.12■□□□□ 0.01
CHL1-209ENST00000461289 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
CHL1-209ENST00000461289 ZNF467Q7Z7K2 595 aaPredicted RBP15.06■□□□□ 0
CHL1-209ENST00000461289 EVX2Q03828 476 aa15.05■□□□□ -0
CHL1-209ENST00000461289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
CHL1-209ENST00000461289 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
CHL1-209ENST00000461289 STK24Q9Y6E0 443 aa15.03■□□□□ -0
CHL1-209ENST00000461289 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
CHL1-209ENST00000461289 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
CHL1-209ENST00000461289 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
CHL1-209ENST00000461289 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
CHL1-209ENST00000461289 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
CHL1-209ENST00000461289 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
CHL1-209ENST00000461289 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
CHL1-209ENST00000461289 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
CHL1-209ENST00000461289 PDAP1Q13442 181 aaKnown RBP14.95□□□□□ -0.02
CHL1-209ENST00000461289 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
CHL1-209ENST00000461289 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
CHL1-209ENST00000461289 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
CHL1-209ENST00000461289 MAP3K13O43283 966 aa14.88□□□□□ -0.03
CHL1-209ENST00000461289 PSEN1P49768 467 aa14.88□□□□□ -0.03
CHL1-209ENST00000461289 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
CHL1-209ENST00000461289 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
CHL1-209ENST00000461289 TSHZ2Q9NRE2 1034 aa14.86□□□□□ -0.03
CHL1-209ENST00000461289 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
CHL1-209ENST00000461289 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
CHL1-209ENST00000461289 GTPBP6O43824 516 aaPredicted RBP14.81□□□□□ -0.04
CHL1-209ENST00000461289 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
CHL1-209ENST00000461289 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
CHL1-209ENST00000461289 CABP2Q9NPB3 220 aa14.71□□□□□ -0.05
CHL1-209ENST00000461289 GABBR2O75899 941 aa14.68□□□□□ -0.06
CHL1-209ENST00000461289 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
CHL1-209ENST00000461289 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
CHL1-209ENST00000461289 BCANQ96GW7 911 aa14.65□□□□□ -0.06
CHL1-209ENST00000461289 EFCAB3Q8N7B9 438 aa14.64□□□□□ -0.07
CHL1-209ENST00000461289 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
CHL1-209ENST00000461289 LHX8Q68G74 356 aa14.62□□□□□ -0.07
CHL1-209ENST00000461289 NLRP6P59044 892 aa14.61□□□□□ -0.07
CHL1-209ENST00000461289 MFRPQ9BY79 579 aa14.61□□□□□ -0.07
CHL1-209ENST00000461289 SOX12O15370 315 aa14.6□□□□□ -0.07
CHL1-209ENST00000461289 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
CHL1-209ENST00000461289 MKRN3Q13064 507 aaKnown RBP14.54□□□□□ -0.08
CHL1-209ENST00000461289 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
CHL1-209ENST00000461289 TIE1P35590 1138 aa14.52□□□□□ -0.09
CHL1-209ENST00000461289 CLCN6P51797 869 aa14.51□□□□□ -0.09
CHL1-209ENST00000461289 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
CHL1-209ENST00000461289 FBXO22Q8NEZ5 403 aa14.48□□□□□ -0.09
CHL1-209ENST00000461289 TTLL13PA6NNM8 815 aa14.47□□□□□ -0.09
CHL1-209ENST00000461289 NBR1Q14596 966 aa14.45□□□□□ -0.1
CHL1-209ENST00000461289 WDR70Q9NW82 654 aa14.45□□□□□ -0.1
CHL1-209ENST00000461289 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
CHL1-209ENST00000461289 PPP1R37O75864 691 aa14.43□□□□□ -0.1
CHL1-209ENST00000461289 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
CHL1-209ENST00000461289 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
CHL1-209ENST00000461289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHL1-209ENST00000461289 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
CHL1-209ENST00000461289 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
CHL1-209ENST00000461289 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
CHL1-209ENST00000461289 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
CHL1-209ENST00000461289 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.13
CHL1-209ENST00000461289 DCBLD2Q96PD2 775 aa14.26□□□□□ -0.13
CHL1-209ENST00000461289 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
CHL1-209ENST00000461289 PDE4AP27815 886 aa14.23□□□□□ -0.13
CHL1-209ENST00000461289 G3V3G9 751 aa14.22□□□□□ -0.13
CHL1-209ENST00000461289 IER5LQ5T953 404 aa14.22□□□□□ -0.13
CHL1-209ENST00000461289 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.13
CHL1-209ENST00000461289 PLCG2P16885 1265 aa14.19□□□□□ -0.14
CHL1-209ENST00000461289 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
CHL1-209ENST00000461289 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
CHL1-209ENST00000461289 OCEL1Q9H607 264 aa14.19□□□□□ -0.14
CHL1-209ENST00000461289 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
CHL1-209ENST00000461289 E2F4Q16254 413 aa14.16□□□□□ -0.14
CHL1-209ENST00000461289 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
CHL1-209ENST00000461289 SEC24BO95487 1268 aa14.15□□□□□ -0.14
CHL1-209ENST00000461289 DDX27Q96GQ7 796 aaKnown RBP14.15□□□□□ -0.14
CHL1-209ENST00000461289 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
CHL1-209ENST00000461289 PDCD7Q8N8D1 485 aaKnown RBP14.14□□□□□ -0.15
CHL1-209ENST00000461289 PLSCR2Q9NRY7 297 aa14.14□□□□□ -0.15
CHL1-209ENST00000461289 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
CHL1-209ENST00000461289 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms