RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PAXIP1Q6ZW49 1069 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-212ENST00000461239 VSIG10Q8N0Z9 540 aa15.6■□□□□ 0.09
ECHDC1-212ENST00000461239 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
ECHDC1-212ENST00000461239 HAX1O00165 279 aa15.57■□□□□ 0.08
ECHDC1-212ENST00000461239 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
ECHDC1-212ENST00000461239 GSE1Q14687 1217 aa15.56■□□□□ 0.08
ECHDC1-212ENST00000461239 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
ECHDC1-212ENST00000461239 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
ECHDC1-212ENST00000461239 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
ECHDC1-212ENST00000461239 CFAP44Q96MT7 982 aa15.54■□□□□ 0.08
ECHDC1-212ENST00000461239 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
ECHDC1-212ENST00000461239 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-212ENST00000461239 MNX1P50219 401 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-212ENST00000461239 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
ECHDC1-212ENST00000461239 RNF25Q96BH1 459 aaPredicted RBP15.52■□□□□ 0.08
ECHDC1-212ENST00000461239 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
ECHDC1-212ENST00000461239 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
ECHDC1-212ENST00000461239 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
ECHDC1-212ENST00000461239 HS6ST3Q8IZP7 471 aa15.46■□□□□ 0.07
ECHDC1-212ENST00000461239 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
ECHDC1-212ENST00000461239 FAM212AQ96EL1 285 aa15.4■□□□□ 0.06
ECHDC1-212ENST00000461239 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
ECHDC1-212ENST00000461239 BCANQ96GW7 911 aa15.39■□□□□ 0.05
ECHDC1-212ENST00000461239 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
ECHDC1-212ENST00000461239 EVX2Q03828 476 aa15.37■□□□□ 0.05
ECHDC1-212ENST00000461239 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
ECHDC1-212ENST00000461239 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
ECHDC1-212ENST00000461239 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
ECHDC1-212ENST00000461239 CHRM1P11229 460 aaPredicted RBP15.31■□□□□ 0.04
ECHDC1-212ENST00000461239 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
ECHDC1-212ENST00000461239 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
ECHDC1-212ENST00000461239 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
ECHDC1-212ENST00000461239 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-212ENST00000461239 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
ECHDC1-212ENST00000461239 STK25O00506 426 aa15.2■□□□□ 0.02
ECHDC1-212ENST00000461239 SGIP1Q9BQI5 828 aa15.2■□□□□ 0.02
ECHDC1-212ENST00000461239 PYGBP11216 843 aa15.18■□□□□ 0.02
ECHDC1-212ENST00000461239 GTPBP6O43824 516 aaPredicted RBP15.17■□□□□ 0.02
ECHDC1-212ENST00000461239 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
ECHDC1-212ENST00000461239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-212ENST00000461239 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-212ENST00000461239 BCL11BQ9C0K0 894 aaPredicted RBP15.11■□□□□ 0.01
ECHDC1-212ENST00000461239 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0
ECHDC1-212ENST00000461239 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
ECHDC1-212ENST00000461239 STK24Q9Y6E0 443 aa15.08■□□□□ 0
ECHDC1-212ENST00000461239 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
ECHDC1-212ENST00000461239 LHX8Q68G74 356 aa15.06■□□□□ 0
ECHDC1-212ENST00000461239 TSPYL2Q9H2G4 693 aaPredicted RBP15.04■□□□□ -0
ECHDC1-212ENST00000461239 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
ECHDC1-212ENST00000461239 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
ECHDC1-212ENST00000461239 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
ECHDC1-212ENST00000461239 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
ECHDC1-212ENST00000461239 RYDENQ9NUL5 291 aaKnown RBP14.96□□□□□ -0.01
ECHDC1-212ENST00000461239 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
ECHDC1-212ENST00000461239 TPRNQ4KMQ1 711 aa14.92□□□□□ -0.02
ECHDC1-212ENST00000461239 PLSCR2Q9NRY7 297 aa14.92□□□□□ -0.02
ECHDC1-212ENST00000461239 PDAP1Q13442 181 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-212ENST00000461239 GABBR2O75899 941 aa14.9□□□□□ -0.02
ECHDC1-212ENST00000461239 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
ECHDC1-212ENST00000461239 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
ECHDC1-212ENST00000461239 NBR1Q14596 966 aa14.87□□□□□ -0.03
ECHDC1-212ENST00000461239 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
ECHDC1-212ENST00000461239 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
ECHDC1-212ENST00000461239 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-212ENST00000461239 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
ECHDC1-212ENST00000461239 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-212ENST00000461239 PSEN1P49768 467 aa14.81□□□□□ -0.04
ECHDC1-212ENST00000461239 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
ECHDC1-212ENST00000461239 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
ECHDC1-212ENST00000461239 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
ECHDC1-212ENST00000461239 MFRPQ9BY79 579 aa14.76□□□□□ -0.05
ECHDC1-212ENST00000461239 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
ECHDC1-212ENST00000461239 KIF12Q96FN5 646 aa14.74□□□□□ -0.05
ECHDC1-212ENST00000461239 MAP3K13O43283 966 aa14.73□□□□□ -0.05
ECHDC1-212ENST00000461239 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
ECHDC1-212ENST00000461239 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
ECHDC1-212ENST00000461239 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
ECHDC1-212ENST00000461239 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
ECHDC1-212ENST00000461239 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
ECHDC1-212ENST00000461239 EFCAB3Q8N7B9 438 aa14.65□□□□□ -0.06
ECHDC1-212ENST00000461239 WIZO95785 1651 aa14.65□□□□□ -0.06
ECHDC1-212ENST00000461239 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
ECHDC1-212ENST00000461239 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
ECHDC1-212ENST00000461239 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
ECHDC1-212ENST00000461239 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-212ENST00000461239 PPP1R37O75864 691 aa14.61□□□□□ -0.07
ECHDC1-212ENST00000461239 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
ECHDC1-212ENST00000461239 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
ECHDC1-212ENST00000461239 SOX12O15370 315 aa14.59□□□□□ -0.07
ECHDC1-212ENST00000461239 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
ECHDC1-212ENST00000461239 NLRP6P59044 892 aa14.58□□□□□ -0.08
ECHDC1-212ENST00000461239 KCNV2Q8TDN2 545 aa14.58□□□□□ -0.08
ECHDC1-212ENST00000461239 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
ECHDC1-212ENST00000461239 PHF12Q96QT6 1004 aa14.57□□□□□ -0.08
ECHDC1-212ENST00000461239 WDR70Q9NW82 654 aa14.57□□□□□ -0.08
ECHDC1-212ENST00000461239 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-212ENST00000461239 MS4A4AQ96JQ5 239 aa14.47□□□□□ -0.09
ECHDC1-212ENST00000461239 TRPC6Q9Y210 931 aa14.44□□□□□ -0.1
ECHDC1-212ENST00000461239 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
ECHDC1-212ENST00000461239 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms