RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 CLCN6P51797 869 aa11.03□□□□□ -0.64
NUP98-208ENST00000461047 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
NUP98-208ENST00000461047 SCRIBQ14160 1630 aa11.02□□□□□ -0.65
NUP98-208ENST00000461047 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
NUP98-208ENST00000461047 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
NUP98-208ENST00000461047 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
NUP98-208ENST00000461047 PHF12Q96QT6 1004 aa10.9□□□□□ -0.66
NUP98-208ENST00000461047 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
NUP98-208ENST00000461047 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
NUP98-208ENST00000461047 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
NUP98-208ENST00000461047 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
NUP98-208ENST00000461047 BICRAQ9NZM4 1560 aa10.87□□□□□ -0.67
NUP98-208ENST00000461047 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
NUP98-208ENST00000461047 FAM212AQ96EL1 285 aa10.83□□□□□ -0.68
NUP98-208ENST00000461047 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
NUP98-208ENST00000461047 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
NUP98-208ENST00000461047 NUBP1P53384 320 aa10.8□□□□□ -0.68
NUP98-208ENST00000461047 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.69
NUP98-208ENST00000461047 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
NUP98-208ENST00000461047 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
NUP98-208ENST00000461047 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
NUP98-208ENST00000461047 MAP3K13O43283 966 aa10.71□□□□□ -0.69
NUP98-208ENST00000461047 GSE1Q14687 1217 aa10.69□□□□□ -0.7
NUP98-208ENST00000461047 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
NUP98-208ENST00000461047 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
NUP98-208ENST00000461047 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
NUP98-208ENST00000461047 SGIP1Q9BQI5 828 aa10.67□□□□□ -0.7
NUP98-208ENST00000461047 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
NUP98-208ENST00000461047 PYGBP11216 843 aa10.63□□□□□ -0.71
NUP98-208ENST00000461047 LHX8Q68G74 356 aa10.63□□□□□ -0.71
NUP98-208ENST00000461047 EIF4G1Q04637 1599 aaKnown RBP10.63□□□□□ -0.71
NUP98-208ENST00000461047 CECR2Q9BXF3 1484 aa10.62□□□□□ -0.71
NUP98-208ENST00000461047 ATMINO43313 823 aaPredicted RBP10.61□□□□□ -0.71
NUP98-208ENST00000461047 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
NUP98-208ENST00000461047 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
NUP98-208ENST00000461047 TIE1P35590 1138 aa10.6□□□□□ -0.71
NUP98-208ENST00000461047 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
NUP98-208ENST00000461047 SLC39A7Q92504 469 aa10.58□□□□□ -0.72
NUP98-208ENST00000461047 BMP2KQ9NSY1 1161 aaPredicted RBP10.57□□□□□ -0.72
NUP98-208ENST00000461047 SMARCA4P51532 1647 aa10.56□□□□□ -0.72
NUP98-208ENST00000461047 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
NUP98-208ENST00000461047 C7P10643 843 aa10.55□□□□□ -0.72
NUP98-208ENST00000461047 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
NUP98-208ENST00000461047 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
NUP98-208ENST00000461047 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
NUP98-208ENST00000461047 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
NUP98-208ENST00000461047 MROH2BQ7Z745 1585 aa10.53□□□□□ -0.72
NUP98-208ENST00000461047 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
NUP98-208ENST00000461047 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
NUP98-208ENST00000461047 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
NUP98-208ENST00000461047 ZNF467Q7Z7K2 595 aaPredicted RBP10.52□□□□□ -0.73
NUP98-208ENST00000461047 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
NUP98-208ENST00000461047 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
NUP98-208ENST00000461047 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
NUP98-208ENST00000461047 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
NUP98-208ENST00000461047 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
NUP98-208ENST00000461047 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
NUP98-208ENST00000461047 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
NUP98-208ENST00000461047 SEC24BO95487 1268 aa10.47□□□□□ -0.73
NUP98-208ENST00000461047 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
NUP98-208ENST00000461047 BAZ1BQ9UIG0 1483 aaKnown RBP10.46□□□□□ -0.74
NUP98-208ENST00000461047 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
NUP98-208ENST00000461047 IER5LQ5T953 404 aa10.43□□□□□ -0.74
NUP98-208ENST00000461047 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
NUP98-208ENST00000461047 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
NUP98-208ENST00000461047 WIZO95785 1651 aa10.39□□□□□ -0.75
NUP98-208ENST00000461047 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
NUP98-208ENST00000461047 PSEN1P49768 467 aa10.39□□□□□ -0.75
NUP98-208ENST00000461047 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
NUP98-208ENST00000461047 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
NUP98-208ENST00000461047 PLCG2P16885 1265 aa10.37□□□□□ -0.75
NUP98-208ENST00000461047 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
NUP98-208ENST00000461047 MKRN3Q13064 507 aaKnown RBP10.35□□□□□ -0.75
NUP98-208ENST00000461047 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
NUP98-208ENST00000461047 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
NUP98-208ENST00000461047 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
NUP98-208ENST00000461047 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
NUP98-208ENST00000461047 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
NUP98-208ENST00000461047 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
NUP98-208ENST00000461047 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
NUP98-208ENST00000461047 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
NUP98-208ENST00000461047 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
NUP98-208ENST00000461047 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
NUP98-208ENST00000461047 POTEJP0CG39 1038 aa10.26□□□□□ -0.77
NUP98-208ENST00000461047 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
NUP98-208ENST00000461047 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
NUP98-208ENST00000461047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.771e-8■■■■□ 24.9
NUP98-208ENST00000461047 CADPSQ9ULU8 1353 aa10.23□□□□□ -0.77
NUP98-208ENST00000461047 RNF25Q96BH1 459 aaPredicted RBP10.21□□□□□ -0.77
NUP98-208ENST00000461047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
NUP98-208ENST00000461047 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
NUP98-208ENST00000461047 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
NUP98-208ENST00000461047 PDS5BQ9NTI5 1447 aa10.18□□□□□ -0.78
NUP98-208ENST00000461047 G3V3G9 751 aa10.18□□□□□ -0.78
NUP98-208ENST00000461047 LAMC3Q9Y6N6 1575 aa10.17□□□□□ -0.78
NUP98-208ENST00000461047 CFTRP13569 1480 aa10.17□□□□□ -0.78
NUP98-208ENST00000461047 PKD2Q13563 968 aa10.16□□□□□ -0.78
NUP98-208ENST00000461047 PDCD7Q8N8D1 485 aaKnown RBP10.16□□□□□ -0.78
NUP98-208ENST00000461047 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
NUP98-208ENST00000461047 C3orf67Q6ZVT6 689 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms