RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 FKBP8Q14318 412 aa12.21□□□□□ -0.45
CCDC58-202ENST00000460810 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
CCDC58-202ENST00000460810 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
CCDC58-202ENST00000460810 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-202ENST00000460810 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
CCDC58-202ENST00000460810 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
CCDC58-202ENST00000460810 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
CCDC58-202ENST00000460810 C7P10643 843 aa12.16□□□□□ -0.46
CCDC58-202ENST00000460810 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
CCDC58-202ENST00000460810 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
CCDC58-202ENST00000460810 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
CCDC58-202ENST00000460810 MAP3K13O43283 966 aa12.12□□□□□ -0.47
CCDC58-202ENST00000460810 NUBP1P53384 320 aa12.09□□□□□ -0.47
CCDC58-202ENST00000460810 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-202ENST00000460810 TIE1P35590 1138 aa12.08□□□□□ -0.48
CCDC58-202ENST00000460810 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
CCDC58-202ENST00000460810 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
CCDC58-202ENST00000460810 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
CCDC58-202ENST00000460810 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
CCDC58-202ENST00000460810 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
CCDC58-202ENST00000460810 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
CCDC58-202ENST00000460810 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
CCDC58-202ENST00000460810 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
CCDC58-202ENST00000460810 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
CCDC58-202ENST00000460810 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
CCDC58-202ENST00000460810 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
CCDC58-202ENST00000460810 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
CCDC58-202ENST00000460810 IER5LQ5T953 404 aa11.91□□□□□ -0.5
CCDC58-202ENST00000460810 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
CCDC58-202ENST00000460810 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CCDC58-202ENST00000460810 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
CCDC58-202ENST00000460810 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
CCDC58-202ENST00000460810 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
CCDC58-202ENST00000460810 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
CCDC58-202ENST00000460810 POTEMA6NI47 508 aa11.82□□□□□ -0.52
CCDC58-202ENST00000460810 PYGBP11216 843 aa11.81□□□□□ -0.52
CCDC58-202ENST00000460810 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
CCDC58-202ENST00000460810 GSE1Q14687 1217 aa11.79□□□□□ -0.52
CCDC58-202ENST00000460810 POTEGQ6S5H5 508 aa11.78□□□□□ -0.52
CCDC58-202ENST00000460810 PLCG2P16885 1265 aa11.73□□□□□ -0.53
CCDC58-202ENST00000460810 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
CCDC58-202ENST00000460810 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
CCDC58-202ENST00000460810 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
CCDC58-202ENST00000460810 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-202ENST00000460810 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-202ENST00000460810 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
CCDC58-202ENST00000460810 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
CCDC58-202ENST00000460810 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-202ENST00000460810 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CCDC58-202ENST00000460810 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
CCDC58-202ENST00000460810 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
CCDC58-202ENST00000460810 SLAIN1Q8ND83 568 aa11.63□□□□□ -0.55
CCDC58-202ENST00000460810 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
CCDC58-202ENST00000460810 PSEN1P49768 467 aa11.57□□□□□ -0.56
CCDC58-202ENST00000460810 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
CCDC58-202ENST00000460810 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
CCDC58-202ENST00000460810 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
CCDC58-202ENST00000460810 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-202ENST00000460810 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
CCDC58-202ENST00000460810 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
CCDC58-202ENST00000460810 ST18O60284 1047 aa11.5□□□□□ -0.57
CCDC58-202ENST00000460810 SNPHO15079 494 aa11.49□□□□□ -0.57
CCDC58-202ENST00000460810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC58-202ENST00000460810 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
CCDC58-202ENST00000460810 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
CCDC58-202ENST00000460810 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
CCDC58-202ENST00000460810 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-202ENST00000460810 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
CCDC58-202ENST00000460810 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
CCDC58-202ENST00000460810 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
CCDC58-202ENST00000460810 G3V3G9 751 aa11.33□□□□□ -0.6
CCDC58-202ENST00000460810 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
CCDC58-202ENST00000460810 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
CCDC58-202ENST00000460810 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CCDC58-202ENST00000460810 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
CCDC58-202ENST00000460810 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-202ENST00000460810 SOX12O15370 315 aa11.23□□□□□ -0.61
CCDC58-202ENST00000460810 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-202ENST00000460810 EMP3P54852 163 aa11.22□□□□□ -0.61
CCDC58-202ENST00000460810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-202ENST00000460810 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-202ENST00000460810 HOXB3P14651 431 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-202ENST00000460810 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
CCDC58-202ENST00000460810 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
CCDC58-202ENST00000460810 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
CCDC58-202ENST00000460810 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CCDC58-202ENST00000460810 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
CCDC58-202ENST00000460810 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
CCDC58-202ENST00000460810 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
CCDC58-202ENST00000460810 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
CCDC58-202ENST00000460810 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
CCDC58-202ENST00000460810 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
CCDC58-202ENST00000460810 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
CCDC58-202ENST00000460810 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
CCDC58-202ENST00000460810 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
CCDC58-202ENST00000460810 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
CCDC58-202ENST00000460810 NLRP6P59044 892 aa11.07□□□□□ -0.64
CCDC58-202ENST00000460810 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
CCDC58-202ENST00000460810 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
CCDC58-202ENST00000460810 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms