RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC93-204ENST00000460781 RASEFQ8IZ41 740 aa8.11□□□□□ -1.11
CCDC93-204ENST00000460781 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-204ENST00000460781 PIP4P2Q8N4L2 257 aa8.1□□□□□ -1.11
CCDC93-204ENST00000460781 RGL2O15211 777 aa8.09□□□□□ -1.11
CCDC93-204ENST00000460781 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
CCDC93-204ENST00000460781 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
CCDC93-204ENST00000460781 PYGBP11216 843 aa8.06□□□□□ -1.12
CCDC93-204ENST00000460781 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-204ENST00000460781 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-204ENST00000460781 ZNF467Q7Z7K2 595 aaPredicted RBP8.03□□□□□ -1.12
CCDC93-204ENST00000460781 CHRM1P11229 460 aaPredicted RBP8.02□□□□□ -1.13
CCDC93-204ENST00000460781 CD44P16070 742 aaKnown RBP8.01□□□□□ -1.13
CCDC93-204ENST00000460781 STK25O00506 426 aa8□□□□□ -1.13
CCDC93-204ENST00000460781 PLCB2Q00722 1185 aa8□□□□□ -1.13
CCDC93-204ENST00000460781 ZRANB1Q9UGI0 708 aa8□□□□□ -1.13
CCDC93-204ENST00000460781 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
CCDC93-204ENST00000460781 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
CCDC93-204ENST00000460781 PAXIP1Q6ZW49 1069 aaPredicted RBP7.97□□□□□ -1.13
CCDC93-204ENST00000460781 HS6ST3Q8IZP7 471 aa7.96□□□□□ -1.14
CCDC93-204ENST00000460781 SPRYD3Q8NCJ5 442 aa7.96□□□□□ -1.14
CCDC93-204ENST00000460781 PCDHB13Q9Y5F0 798 aa7.96□□□□□ -1.14
CCDC93-204ENST00000460781 STK24Q9Y6E0 443 aa7.96□□□□□ -1.14
CCDC93-204ENST00000460781 RYDENQ9NUL5 291 aaKnown RBP7.95□□□□□ -1.14
CCDC93-204ENST00000460781 PDAP1Q13442 181 aaKnown RBP7.94□□□□□ -1.14
CCDC93-204ENST00000460781 CCDC61Q9Y6R9 512 aa7.94□□□□□ -1.14
CCDC93-204ENST00000460781 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
CCDC93-204ENST00000460781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-204ENST00000460781 HAX1O00165 279 aa7.92□□□□□ -1.14
CCDC93-204ENST00000460781 ZNF579Q8NAF0 562 aaKnown RBP7.92□□□□□ -1.14
CCDC93-204ENST00000460781 ZFP91Q96JP5 570 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-204ENST00000460781 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
CCDC93-204ENST00000460781 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-204ENST00000460781 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
CCDC93-204ENST00000460781 PSEN1P49768 467 aa7.89□□□□□ -1.15
CCDC93-204ENST00000460781 PCDHB8Q9UN66 801 aa7.89□□□□□ -1.15
CCDC93-204ENST00000460781 MAP3K13O43283 966 aa7.87□□□□□ -1.15
CCDC93-204ENST00000460781 PHF12Q96QT6 1004 aa7.87□□□□□ -1.15
CCDC93-204ENST00000460781 KIF12Q96FN5 646 aa7.86□□□□□ -1.15
CCDC93-204ENST00000460781 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
CCDC93-204ENST00000460781 IFNL1Q8IU54 200 aa7.84□□□□□ -1.15
CCDC93-204ENST00000460781 CLCN6P51797 869 aa7.83□□□□□ -1.16
CCDC93-204ENST00000460781 VSIG10Q8N0Z9 540 aa7.8□□□□□ -1.16
CCDC93-204ENST00000460781 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
CCDC93-204ENST00000460781 CABP2Q9NPB3 220 aa7.8□□□□□ -1.16
CCDC93-204ENST00000460781 MKRN3Q13064 507 aaKnown RBP7.79□□□□□ -1.16
CCDC93-204ENST00000460781 TMEM106CQ9BVX2 250 aa7.79□□□□□ -1.16
CCDC93-204ENST00000460781 MS4A3Q96HJ5 214 aa7.78□□□□□ -1.16
CCDC93-204ENST00000460781 NLRP6P59044 892 aa7.76□□□□□ -1.17
CCDC93-204ENST00000460781 SOX12O15370 315 aa7.75□□□□□ -1.17
CCDC93-204ENST00000460781 POTEHQ6S545 545 aa7.74□□□□□ -1.17
CCDC93-204ENST00000460781 TIE1P35590 1138 aa7.73□□□□□ -1.17
CCDC93-204ENST00000460781 NKX1-1Q15270 411 aaPredicted RBP7.73□□□□□ -1.17
CCDC93-204ENST00000460781 EFCAB3Q8N7B9 438 aa7.73□□□□□ -1.17
CCDC93-204ENST00000460781 GTPBP6O43824 516 aaPredicted RBP7.72□□□□□ -1.17
CCDC93-204ENST00000460781 G3V3G9 751 aa7.71□□□□□ -1.18
CCDC93-204ENST00000460781 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
CCDC93-204ENST00000460781 DCBLD2Q96PD2 775 aa7.7□□□□□ -1.18
CCDC93-204ENST00000460781 WDR70Q9NW82 654 aa7.7□□□□□ -1.18
CCDC93-204ENST00000460781 GALR2O43603 387 aaPredicted RBP7.68□□□□□ -1.18
CCDC93-204ENST00000460781 TTLL13PA6NNM8 815 aa7.67□□□□□ -1.18
CCDC93-204ENST00000460781 PHF8Q9UPP1 1060 aa7.67□□□□□ -1.18
CCDC93-204ENST00000460781 MFRPQ9BY79 579 aa7.66□□□□□ -1.18
CCDC93-204ENST00000460781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.66□□□□□ -1.181e-6■■□□□ 14.5
CCDC93-204ENST00000460781 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
CCDC93-204ENST00000460781 BMP2KQ9NSY1 1161 aaPredicted RBP7.65□□□□□ -1.18
CCDC93-204ENST00000460781 BCANQ96GW7 911 aa7.64□□□□□ -1.19
CCDC93-204ENST00000460781 NBR1Q14596 966 aa7.63□□□□□ -1.19
CCDC93-204ENST00000460781 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
CCDC93-204ENST00000460781 SEC24BO95487 1268 aa7.62□□□□□ -1.19
CCDC93-204ENST00000460781 PLCG2P16885 1265 aa7.62□□□□□ -1.19
CCDC93-204ENST00000460781 GABBR2O75899 941 aa7.61□□□□□ -1.19
CCDC93-204ENST00000460781 EVX2Q03828 476 aa7.61□□□□□ -1.19
CCDC93-204ENST00000460781 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
CCDC93-204ENST00000460781 IER5LQ5T953 404 aa7.59□□□□□ -1.19
CCDC93-204ENST00000460781 FBXO22Q8NEZ5 403 aa7.58□□□□□ -1.2
CCDC93-204ENST00000460781 KDM2AQ9Y2K7 1162 aa7.58□□□□□ -1.2
CCDC93-204ENST00000460781 ATMINO43313 823 aaPredicted RBP7.57□□□□□ -1.2
CCDC93-204ENST00000460781 ATN1P54259 1190 aaPredicted RBP7.57□□□□□ -1.2
CCDC93-204ENST00000460781 OCEL1Q9H607 264 aa7.56□□□□□ -1.2
CCDC93-204ENST00000460781 PDE4AP27815 886 aa7.55□□□□□ -1.2
CCDC93-204ENST00000460781 ASTLQ6HA08 431 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-204ENST00000460781 SP7Q8TDD2 431 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-204ENST00000460781 SLC39A7Q92504 469 aa7.55□□□□□ -1.2
CCDC93-204ENST00000460781 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
CCDC93-204ENST00000460781 PPP1R37O75864 691 aa7.53□□□□□ -1.2
CCDC93-204ENST00000460781 TULP1O00294 542 aaPredicted RBP7.52□□□□□ -1.21
CCDC93-204ENST00000460781 TMC2Q8TDI7 906 aa7.52□□□□□ -1.21
CCDC93-204ENST00000460781 C7P10643 843 aa7.51□□□□□ -1.21
CCDC93-204ENST00000460781 MS4A4AQ96JQ5 239 aa7.51□□□□□ -1.21
CCDC93-204ENST00000460781 LARP6Q9BRS8 491 aaKnown RBP7.5□□□□□ -1.21
CCDC93-204ENST00000460781 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
CCDC93-204ENST00000460781 C3orf67Q6ZVT6 689 aa7.49□□□□□ -1.21
CCDC93-204ENST00000460781 DDX27Q96GQ7 796 aaKnown RBP7.49□□□□□ -1.21
CCDC93-204ENST00000460781 IRX5P78411 483 aaPredicted RBP7.48□□□□□ -1.21
CCDC93-204ENST00000460781 CADPS2Q86UW7 1296 aa7.48□□□□□ -1.21
CCDC93-204ENST00000460781 E2F4Q16254 413 aa7.47□□□□□ -1.21
CCDC93-204ENST00000460781 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
CCDC93-204ENST00000460781 METRNQ9UJH8 293 aa7.47□□□□□ -1.21
CCDC93-204ENST00000460781 DPY19L2Q6NUT2 758 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms